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Support counts the member genes carrying the term. % of genes is that count over all 921 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD | 758 / 921 | 82.3% | 93.0% of 815 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 789 / 921 | 85.7% | 96.2% of 820 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 760 / 921 | 82.5% | 92.7% of 820 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 759 / 921 | 82.4% | 92.6% of 820 | ≥80% support |
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 608 / 921 | 66.0% | 74.2% of 820 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 730 / 921 | 79.3% | 89.6% of 815 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 626 / 921 | 68.0% | 76.3% of 820 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra viridissima | BRAKERKREP00000000602.1 | XP_002166522.2 | eukaryotic initiation factor 4A-III [Hydra vulgaris] | B5FZY7 Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata O | JBrowse |
| Hydra viridissima | BRAKERKREP00000002461.1 | XP_012566758.1 | probable ATP-dependent RNA helicase ddx20 isoform X1 [Hydra vulgaris] | P0C218 Probable ATP-dependent RNA helicase DDX20 OS=Danio rerio OX= | JBrowse |
| Hydra viridissima | BRAKERKREP00000009054.1 | XP_002163229.1 | eukaryotic initiation factor 4A-I [Hydra vulgaris] | Q3SZ65 Eukaryotic initiation factor 4A-II OS=Bos taurus OX=9913 GN= | JBrowse |
| Hydra viridissima | BRAKERKREP00000019682.1 | XP_002164714.2 | probable ATP-dependent RNA helicase DDX6 [Hydra vulgaris] | P54824 ATP-dependent RNA helicase ddx6 OS=Xenopus laevis OX=8355 GN | JBrowse |
| Hydra viridissima | BRAKERKREP00000019697.1 | XP_002164714.2 | probable ATP-dependent RNA helicase DDX6 [Hydra vulgaris] | Q0IHV9 Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropical | JBrowse |
| Hydra viridissima | g16512.t1.1 | none | – | JBrowse | |
| Hydra viridissima | g16514.t1.1 | none | – | JBrowse | |
| Hydra viridissima | g21723.t1.1 | none | – | JBrowse | |
| Hydra viridissima | g22509.t1.1 | none | – | JBrowse | |
| Hydra viridissima | g9662.t1.1 | none | – | JBrowse |
