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Support counts the member genes carrying the term. % of genes is that count over all 321 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11207 | RIBONUCLEASE III | 224 / 321 | 69.8% | 94.1% of 238 | ≥50% support |
| Pfam | PF14622 | Ribonucleas_3_3 — Ribonuclease-III-like | 204 / 321 | 63.6% | 85.0% of 240 | ≥50% support |
| Pfam | PF00035 | dsrm — Double-stranded RNA binding motif | 173 / 321 | 53.9% | 72.1% of 240 | ≥50% support |
| GO | GO:0004525 Molecular Function | ribonuclease III activity | 240 / 321 | 74.8% | 99.6% of 241 | ≥50% support |
| GO | GO:0006396 Biological Process | RNA processing | 240 / 321 | 74.8% | 99.6% of 241 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 217 / 321 | 67.6% | 90.0% of 241 | ≥50% support |
| GO | GO:0070877 Cellular Component | microprocessor complex | 198 / 321 | 61.7% | 82.2% of 241 | ≥50% support |
| GO | GO:0031054 Biological Process | pre-miRNA processing | 190 / 321 | 59.2% | 78.8% of 241 | ≥50% support |
| GO | GO:0031053 Biological Process | primary miRNA processing | 187 / 321 | 58.3% | 77.6% of 241 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 173 / 321 | 53.9% | 71.8% of 241 | ≥50% support |
| GO | GO:0006364 Biological Process | rRNA processing | 170 / 321 | 53.0% | 70.5% of 241 | ≥50% support |
| KEGG | K03685 | rnc, DROSHA, RNT1 — Chromosome and associated proteins | 161 / 321 | 50.2% | 98.8% of 163 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra viridissima | BRAKERKREP00000014642.1 | XP_047134305.1 | ribonuclease 3-like isoform X1 [Hydra vulgaris] | Q5HZJ0 Ribonuclease 3 OS=Mus musculus OX=10090 GN=Drosha PE=1 SV=1 | JBrowse |
| Hydra viridissima | BRAKERKREP00000014643.1 | XP_047134305.1 | ribonuclease 3-like isoform X1 [Hydra vulgaris] | Q5HZJ0 Ribonuclease 3 OS=Mus musculus OX=10090 GN=Drosha PE=1 SV=1 | JBrowse |
| Hydra viridissima | BRAKERKREP00000014644.1 | XP_047134305.1 | ribonuclease 3-like isoform X1 [Hydra vulgaris] | Q5HZJ0 Ribonuclease 3 OS=Mus musculus OX=10090 GN=Drosha PE=1 SV=1 | JBrowse |
| Hydra viridissima | BRAKERKREP00000014645.1 | XP_047134305.1 | ribonuclease 3-like isoform X1 [Hydra vulgaris] | Q5HZJ0 Ribonuclease 3 OS=Mus musculus OX=10090 GN=Drosha PE=1 SV=1 | JBrowse |
| Hydra viridissima | BRAKERKREP00000014713.1 | XP_047134306.1 | ribonuclease 3-like isoform X2 [Hydra vulgaris] | – | JBrowse |
| Hydra viridissima | BRAKERKREP00000022473.1 | WP_129241914.1 | signal peptidase I [Achromobacter veterisilvae] | Q7WD32 Ribonuclease 3 OS=Bordetella bronchiseptica (strain ATCC BAA | JBrowse |
| Hydra viridissima | g14916.t1.1 | none | – | JBrowse | |
| Hydra viridissima | g14916.t2.1 | none | – | JBrowse | |
| Hydra viridissima | g14916.t3.1 | none | – | JBrowse | |
| Hydra viridissima | g14916.t4.1 | none | – | JBrowse | |
| Hydra viridissima | g14917.t1.1 | none | – | JBrowse | |
| Hydra viridissima | g20436.t1.1 | none | – | JBrowse |
