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Support counts the member genes carrying the term. % of genes is that count over all 56 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF03466 | LysR_substrate — LysR substrate binding domain | 49 / 56 | 87.5% | 96.1% of 51 | ≥80% support |
| Pfam | PF00126 | HTH_1 — Bacterial regulatory helix-turn-helix protein, lysR family | 46 / 56 | 82.1% | 90.2% of 51 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 49 / 56 | 87.5% | 100.0% of 49 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 48 / 56 | 85.7% | 98.0% of 49 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra viridissima | BRAKERKREP00000023051.1 | WP_054438462.1 | LysR substrate-binding domain-containing protein [Achromobacter xylosoxidans] | P0ACQ6 Hydrogen peroxide-inducible genes activator OS=Escherichia c | JBrowse |
| Hydra viridissima | BRAKERKREP00000023725.1 | HCW19590.1 | LysR family transcriptional regulator [Achromobacter sp.] | P25544 RuBisCO operon transcriptional regulator OS=Allochromatium v | JBrowse |
| Hydra viridissima | g20241.t1.1 | none | – | JBrowse | |
| Hydra viridissima | g20750.t1.1 | none | – | JBrowse |
