In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_001483-T1 | XP_015761886.1 | PREDICTED: limbic system-associated membrane protein-like [Acropora digitifera] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_001505-T1 | XP_020629446.1 | protein amalgam-like [Orbicella faveolata] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_001506-T1 | XP_027049061.1 | fibroblast growth factor receptor 1-like isoform X4 [Pocillopora damicornis] | Q6V4S5 Protein sidekick-2 OS=Mus musculus OX=10090 GN=Sdk2 PE=1 SV= | JBrowse |
| Lophelia pertusa | OS493_001510-T1 | PFX18409.1 | Proto-oncogene tyrosine-protein kinase receptor Ret [Stylophora pistillata] | – | JBrowse |
| Lophelia pertusa | OS493_001511-T1 | XP_031564759.1 | fibroblast growth factor receptor 2-like isoform X3 [Actinia tenebrosa] | P35969 Vascular endothelial growth factor receptor 1 OS=Mus musculu | JBrowse |
| Lophelia pertusa | OS493_001512-T1 | XP_048588691.1 | hemicentin-1 isoform X5 [Nematostella vectensis] | P22063 Contactin-2 OS=Rattus norvegicus OX=10116 GN=Cntn2 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_001513-T1 | XP_020631300.1 | tyrosine-protein kinase receptor Tie-1-like [Orbicella faveolata] | Q07E48 Hepatocyte growth factor receptor OS=Dasypus novemcinctus OX | JBrowse |
| Lophelia pertusa | OS493_001515-T1 | XP_015747768.1 | PREDICTED: proto-oncogene tyrosine-protein kinase receptor Ret-like [Acropora digitifera] | – | JBrowse |
| Lophelia pertusa | OS493_001516-T1 | XP_027049061.1 | fibroblast growth factor receptor 1-like isoform X4 [Pocillopora damicornis] | Q5XKE0 Myosin-binding protein C, fast-type OS=Mus musculus OX=10090 | JBrowse |
| Lophelia pertusa | OS493_001519-T1 | CAH3017909.1 | unnamed protein product, partial [Porites evermanni] | – | JBrowse |
| Lophelia pertusa | OS493_004571-T1 | CAH3117471.1 | unnamed protein product, partial [Pocillopora meandrina] | – | JBrowse |
| Lophelia pertusa | OS493_009171-T1 | XP_013783900.1 | LOW QUALITY PROTEIN: tyrosine-protein kinase Src42A-like [Limulus polyphemus] | Q1JPZ3 Proto-oncogene tyrosine-protein kinase Src OS=Danio rerio OX | JBrowse |
| Lophelia pertusa | OS493_010549-T1 | CAH3157609.1 | unnamed protein product [Porites lobata] | – | JBrowse |
| Lophelia pertusa | OS493_014146-T1 | CAH3035809.1 | unnamed protein product [Pocillopora meandrina] | G3V9H8 Proto-oncogene tyrosine-protein kinase receptor Ret OS=Rattu | JBrowse |
| Lophelia pertusa | OS493_020492-T1 | XP_022804495.1 | uncharacterized protein LOC111341760 isoform X1 [Stylophora pistillata] | Q91285 Fibroblast growth factor receptor 1 OS=Pleurodeles waltl OX= | JBrowse |
| Lophelia pertusa | OS493_020493-T1 | XP_022801145.1 | uncharacterized protein LOC111338863 [Stylophora pistillata] | – | JBrowse |
| Lophelia pertusa | OS493_020502-T1 | CAH3115497.1 | unnamed protein product [Porites lobata] | G3V9H8 Proto-oncogene tyrosine-protein kinase receptor Ret OS=Rattu | JBrowse |
| Lophelia pertusa | OS493_020503-T1 | CAH3115473.1 | unnamed protein product [Porites lobata] | – | JBrowse |
| Lophelia pertusa | OS493_020507-T1 | KAJ7372078.1 | hypothetical protein OS493_020502 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_020508-T1 | XP_020632265.1 | RAF proto-oncogene serine/threonine-protein kinase-like [Orbicella faveolata] | G3V9H8 Proto-oncogene tyrosine-protein kinase receptor Ret OS=Rattu | JBrowse |
