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Support counts the member genes carrying the term. % of genes is that count over all 5,156 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18945 | NEUROTRANSMITTER GATED ION CHANNEL | 4668 / 5,156 | 90.5% | 99.9% of 4,674 | ≥80% support |
| Pfam | PF02931 | Neur_chan_LBD — Neurotransmitter-gated ion-channel ligand binding domain | 4502 / 5,156 | 87.3% | 95.2% of 4,727 | ≥80% support |
| Pfam | PF02932 | Neur_chan_memb — Neurotransmitter-gated ion-channel transmembrane region | 4371 / 5,156 | 84.8% | 92.5% of 4,727 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 4779 / 5,156 | 92.7% | 100.0% of 4,779 | ≥80% support |
| GO | GO:0006811 Biological Process | monoatomic ion transport | 4779 / 5,156 | 92.7% | 100.0% of 4,779 | ≥80% support |
| GO | GO:0005216 Molecular Function | monoatomic ion channel activity | 4713 / 5,156 | 91.4% | 98.6% of 4,779 | ≥80% support |
| GO | GO:0034220 Biological Process | monoatomic ion transmembrane transport | 4712 / 5,156 | 91.4% | 98.6% of 4,779 | ≥80% support |
| GO | GO:0004888 Molecular Function | transmembrane signaling receptor activity | 4712 / 5,156 | 91.4% | 98.6% of 4,779 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 4669 / 5,156 | 90.6% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0007165 Biological Process | signal transduction | 4668 / 5,156 | 90.5% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0007268 Biological Process | chemical synaptic transmission | 4668 / 5,156 | 90.5% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0030594 Molecular Function | neurotransmitter receptor activity | 4668 / 5,156 | 90.5% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0042391 Biological Process | regulation of membrane potential | 4668 / 5,156 | 90.5% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0043005 Cellular Component | neuron projection | 4668 / 5,156 | 90.5% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0045202 Cellular Component | synapse | 4668 / 5,156 | 90.5% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0050877 Biological Process | nervous system process | 4668 / 5,156 | 90.5% | 97.7% of 4,779 | ≥80% support |
| GO | GO:0005230 Molecular Function | extracellular ligand-gated monoatomic ion channel activity | 4537 / 5,156 | 88.0% | 94.9% of 4,779 | ≥80% support |
| GO | GO:0005254 Molecular Function | chloride channel activity | 3382 / 5,156 | 65.6% | 70.8% of 4,779 | ≥50% support |
| GO | GO:1902476 Biological Process | chloride transmembrane transport | 3382 / 5,156 | 65.6% | 70.8% of 4,779 | ≥50% support |
| GO | GO:1904315 Molecular Function | transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential | 3377 / 5,156 | 65.5% | 70.7% of 4,779 | ≥50% support |
| GO | GO:0005231 Molecular Function | excitatory extracellular ligand-gated monoatomic ion channel activity | 3377 / 5,156 | 65.5% | 70.7% of 4,779 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_000495-T1 | KAJ7394674.1 | hypothetical protein OS493_000495 [Desmophyllum pertusum] | O18276 Gamma-aminobutyric acid receptor subunit beta OS=Caenorhabdi | JBrowse |
| Lophelia pertusa | OS493_001898-T1 | KAJ7375160.1 | hypothetical protein OS493_001898 [Desmophyllum pertusum] | P63138 Gamma-aminobutyric acid receptor subunit beta-2 OS=Rattus no | JBrowse |
| Lophelia pertusa | OS493_001899-T1 | KAJ7375161.1 | hypothetical protein OS493_001899 [Desmophyllum pertusum] | P63138 Gamma-aminobutyric acid receptor subunit beta-2 OS=Rattus no | JBrowse |
| Lophelia pertusa | OS493_001900-T1 | KAJ7375162.1 | hypothetical protein OS493_001900 [Desmophyllum pertusum] | P63138 Gamma-aminobutyric acid receptor subunit beta-2 OS=Rattus no | JBrowse |
| Lophelia pertusa | OS493_001901-T1 | KAJ7375163.1 | hypothetical protein OS493_001901 [Desmophyllum pertusum] | Q99928 Gamma-aminobutyric acid receptor subunit gamma-3 OS=Homo sap | JBrowse |
| Lophelia pertusa | OS493_010338-T1 | KAJ7392687.1 | hypothetical protein OS493_010338 [Desmophyllum pertusum] | O93430 Glycine receptor subunit alphaZ1 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Lophelia pertusa | OS493_014838-T1 | KAJ7334515.1 | hypothetical protein OS493_014838 [Desmophyllum pertusum] | P50571 Gamma-aminobutyric acid receptor subunit beta-1 OS=Mus muscu | JBrowse |
| Lophelia pertusa | OS493_017363-T1 | KAJ7391666.1 | hypothetical protein OS493_017363 [Desmophyllum pertusum] | O93430 Glycine receptor subunit alphaZ1 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Lophelia pertusa | OS493_017364-T1 | KAJ7391667.1 | Glycine receptor subunit alpha-3 [Desmophyllum pertusum] | P24524 Glycine receptor subunit alpha-3 OS=Rattus norvegicus OX=101 | JBrowse |
| Lophelia pertusa | OS493_017365-T1 | KAJ7391668.1 | hypothetical protein OS493_017365 [Desmophyllum pertusum] | O93430 Glycine receptor subunit alphaZ1 OS=Danio rerio OX=7955 GN=g | JBrowse |
| Lophelia pertusa | OS493_017366-T1 | KAJ7391669.1 | hypothetical protein OS493_017366 [Desmophyllum pertusum] | Q7TNC8 Glycine receptor subunit alpha-2 OS=Mus musculus OX=10090 GN | JBrowse |
| Lophelia pertusa | OS493_017367-T1 | KAJ7391670.1 | hypothetical protein OS493_017367 [Desmophyllum pertusum] | P22933 Gamma-aminobutyric acid receptor subunit delta OS=Mus muscul | JBrowse |
| Lophelia pertusa | OS493_017368-T1 | KAJ7391671.1 | hypothetical protein OS493_017368 [Desmophyllum pertusum] | P57695 Glycine receptor subunit alpha-1 OS=Bos taurus OX=9913 GN=GL | JBrowse |
| Lophelia pertusa | OS493_017369-T1 | KAJ7391672.1 | hypothetical protein OS493_017369 [Desmophyllum pertusum] | Q08832 Gamma-aminobutyric acid receptor subunit beta-like OS=Drosop | JBrowse |
| Lophelia pertusa | OS493_017370-T1 | KAJ7391673.1 | hypothetical protein OS493_017370 [Desmophyllum pertusum] | Q08832 Gamma-aminobutyric acid receptor subunit beta-like OS=Drosop | JBrowse |
| Lophelia pertusa | OS493_017401-T1 | KAJ7391704.1 | hypothetical protein OS493_017401 [Desmophyllum pertusum] | P26714 Gamma-aminobutyric acid receptor subunit beta OS=Lymnaea sta | JBrowse |
| Lophelia pertusa | OS493_019167-T1 | KAJ7331583.1 | Gamma-aminobutyric acid receptor subunit beta-2 [Desmophyllum pertusum] | P63080 Gamma-aminobutyric acid receptor subunit beta-3 OS=Mus muscu | JBrowse |
| Lophelia pertusa | OS493_021463-T1 | KAJ7372035.1 | hypothetical protein OS493_021463 [Desmophyllum pertusum] | P57695 Glycine receptor subunit alpha-1 OS=Bos taurus OX=9913 GN=GL | JBrowse |
| Lophelia pertusa | OS493_021464-T1 | KAJ7372036.1 | hypothetical protein OS493_021464 [Desmophyllum pertusum] | P19019 Gamma-aminobutyric acid receptor subunit beta-3 OS=Gallus ga | JBrowse |
| Lophelia pertusa | OS493_021474-T1 | KAJ7372046.1 | hypothetical protein OS493_021474 [Desmophyllum pertusum] | P57695 Glycine receptor subunit alpha-1 OS=Bos taurus OX=9913 GN=GL | JBrowse |
