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Support counts the member genes carrying the term. % of genes is that count over all 4,961 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00001 | 7tm_1 — 7 transmembrane receptor (rhodopsin family) | 4669 / 4,961 | 94.1% | 100.0% of 4,670 | ≥80% support |
| GO | GO:0007186 Biological Process | G protein-coupled receptor signaling pathway | 4680 / 4,961 | 94.3% | 100.0% of 4,680 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 4679 / 4,961 | 94.3% | 100.0% of 4,680 | ≥80% support |
| GO | GO:0004930 Molecular Function | G protein-coupled receptor activity | 4676 / 4,961 | 94.3% | 99.9% of 4,680 | ≥80% support |
| PANTHER | PTHR24240 | OPSIN | 3580 / 4,961 | 72.2% | 76.7% of 4,669 | ≥50% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 3624 / 4,961 | 73.1% | 77.4% of 4,680 | ≥50% support |
| GO | GO:0007602 Biological Process | phototransduction | 3507 / 4,961 | 70.7% | 74.9% of 4,680 | ≥50% support |
| GO | GO:0008020 Molecular Function | G protein-coupled photoreceptor activity | 3507 / 4,961 | 70.7% | 74.9% of 4,680 | ≥50% support |
| GO | GO:0071482 Biological Process | cellular response to light stimulus | 3507 / 4,961 | 70.7% | 74.9% of 4,680 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_000592-T1 | KAJ7394759.1 | Melatonin- receptor [Desmophyllum pertusum] | Q8CIQ6 Melatonin receptor type 1B OS=Mus musculus OX=10090 GN=Mtnr1 | JBrowse |
| Lophelia pertusa | OS493_000888-T1 | KAJ7387557.1 | hypothetical protein OS493_000888 [Desmophyllum pertusum] | Q2KNE5 Melanopsin-A OS=Danio rerio OX=7955 GN=opn4a PE=2 SV=3 | JBrowse |
| Lophelia pertusa | OS493_002312-T1 | KAJ7365607.1 | Melatonin- receptor [Desmophyllum pertusum] | P49285 Melatonin receptor type 1A OS=Gallus gallus OX=9031 PE=2 SV= | JBrowse |
| Lophelia pertusa | OS493_002313-T1 | KAJ7365608.1 | Melatonin- receptor [Desmophyllum pertusum] | Q8CIQ6 Melatonin receptor type 1B OS=Mus musculus OX=10090 GN=Mtnr1 | JBrowse |
| Lophelia pertusa | OS493_002319-T1 | KAJ7365611.1 | Melatonin- receptor [Desmophyllum pertusum] | P49287 Melatonin receptor type 1B OS=Rattus norvegicus OX=10116 GN= | JBrowse |
| Lophelia pertusa | OS493_002320-T1 | KAJ7365612.1 | Melatonin- receptor [Desmophyllum pertusum] | P70031 Cholecystokinin receptor OS=Xenopus laevis OX=8355 GN=cckar | JBrowse |
| Lophelia pertusa | OS493_002321-T1 | KAJ7365613.1 | Melatonin- receptor [Desmophyllum pertusum] | P49287 Melatonin receptor type 1B OS=Rattus norvegicus OX=10116 GN= | JBrowse |
| Lophelia pertusa | OS493_002322-T1 | KAJ7365614.1 | Melatonin- receptor [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_003744-T1 | KAJ7394070.1 | Melatonin- receptor [Desmophyllum pertusum] | P97288 5-hydroxytryptamine receptor 4 OS=Mus musculus OX=10090 GN=H | JBrowse |
| Lophelia pertusa | OS493_004983-T1 | KAJ7374644.1 | G-protein coupled receptor 1 [Desmophyllum pertusum] | P42288 D(1A) dopamine receptor OS=Didelphis virginiana OX=9267 GN=D | JBrowse |
| Lophelia pertusa | OS493_005192-T1 | KAJ7374840.1 | hypothetical protein OS493_005192 [Desmophyllum pertusum] | Q8K4Z4 Beta-2 adrenergic receptor OS=Cavia porcellus OX=10141 GN=Ad | JBrowse |
| Lophelia pertusa | OS493_007365-T1 | KAJ7374283.1 | melatonin receptor [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_007366-T1 | KAJ7374284.1 | melatonin receptor [Desmophyllum pertusum] | P54833 Beta-2 adrenergic receptor OS=Canis lupus familiaris OX=9615 | JBrowse |
| Lophelia pertusa | OS493_007711-T1 | KAJ7365068.1 | Melatonin- receptor [Desmophyllum pertusum] | Q5QD25 Trace amine-associated receptor 2 OS=Rattus norvegicus OX=10 | JBrowse |
| Lophelia pertusa | OS493_011827-T1 | KAJ7336609.1 | hypothetical protein OS493_011827 [Desmophyllum pertusum] | P09241 Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV= | JBrowse |
| Lophelia pertusa | OS493_011955-T1 | KAJ7392298.1 | hypothetical protein OS493_011955 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_012101-T1 | KAJ7392438.1 | hypothetical protein OS493_012101 [Desmophyllum pertusum] | P49285 Melatonin receptor type 1A OS=Gallus gallus OX=9031 PE=2 SV= | JBrowse |
| Lophelia pertusa | OS493_012102-T1 | KAJ7392439.1 | hypothetical protein OS493_012102 [Desmophyllum pertusum] | Q61184 Melatonin receptor type 1A OS=Mus musculus OX=10090 GN=Mtnr1 | JBrowse |
| Lophelia pertusa | OS493_014542-T1 | KAJ7361896.1 | Melatonin- receptor [Desmophyllum pertusum] | O57422 Melanopsin-B OS=Xenopus laevis OX=8355 GN=opn4b PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_014546-T1 | KAJ7361900.1 | Melatonin- receptor [Desmophyllum pertusum] | P51049 Melatonin receptor type 1B-B OS=Danio rerio OX=7955 GN=mtnr1 | JBrowse |
