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Support counts the member genes carrying the term. % of genes is that count over all 2,726 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF21549 | PRDM2_PR — PR domain zinc finger protein 2, PR domain | 2384 / 2,726 | 87.5% | 96.9% of 2,460 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 2336 / 2,726 | 85.7% | 96.3% of 2,426 | ≥80% support |
| PANTHER | PTHR16515 | PR DOMAIN ZINC FINGER PROTEIN | 1602 / 2,726 | 58.8% | 73.5% of 2,181 | ≥50% support |
| Pfam | PF00096 | zf-C2H2 — Zinc finger, C2H2 type | 1931 / 2,726 | 70.8% | 78.5% of 2,460 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 1926 / 2,726 | 70.7% | 79.4% of 2,426 | ≥50% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 1602 / 2,726 | 58.8% | 66.0% of 2,426 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1536 / 2,726 | 56.4% | 63.3% of 2,426 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_002186-T1 | KAJ7375422.1 | Histone-lysine N-methyltransferase prdm9 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_003515-T1 | KAJ7393848.1 | Histone-lysine N-methyltransferase prdm9 [Desmophyllum pertusum] | Q9NQW5 Histone-lysine N-methyltransferase PRDM7 OS=Homo sapiens OX= | JBrowse |
| Lophelia pertusa | OS493_004407-T1 | KAJ7387412.1 | Histone-lysine N-methyltransferase prdm9 [Desmophyllum pertusum] | P0C6Y7 Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicu | JBrowse |
| Lophelia pertusa | OS493_005995-T1 | KAJ7339592.1 | PR domain zinc finger protein 12 [Desmophyllum pertusum] | A2AJ77 PR domain zinc finger protein 12 OS=Mus musculus OX=10090 GN | JBrowse |
| Lophelia pertusa | OS493_006054-T1 | KAJ7339647.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | E9Q3T6 PR domain zinc finger protein 14 OS=Mus musculus OX=10090 GN | JBrowse |
| Lophelia pertusa | OS493_006055-T1 | KAJ7339648.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | A6QPM3 Putative histone-lysine N-methyltransferase PRDM6 OS=Bos tau | JBrowse |
| Lophelia pertusa | OS493_006056-T1 | KAJ7339649.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | Q3UZD5 Putative histone-lysine N-methyltransferase PRDM6 OS=Mus mus | JBrowse |
| Lophelia pertusa | OS493_006057-T1 | KAJ7339650.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | A6QPM3 Putative histone-lysine N-methyltransferase PRDM6 OS=Bos tau | JBrowse |
| Lophelia pertusa | OS493_006058-T1 | KAJ7339651.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | Q3UZD5 Putative histone-lysine N-methyltransferase PRDM6 OS=Mus mus | JBrowse |
| Lophelia pertusa | OS493_006059-T1 | KAJ7339652.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | A6QPM3 Putative histone-lysine N-methyltransferase PRDM6 OS=Bos tau | JBrowse |
| Lophelia pertusa | OS493_006060-T1 | KAJ7339653.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | Q3UZD5 Putative histone-lysine N-methyltransferase PRDM6 OS=Mus mus | JBrowse |
| Lophelia pertusa | OS493_006061-T1 | KAJ7339654.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | A6QPM3 Putative histone-lysine N-methyltransferase PRDM6 OS=Bos tau | JBrowse |
| Lophelia pertusa | OS493_006062-T1 | KAJ7339655.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | A6QPM3 Putative histone-lysine N-methyltransferase PRDM6 OS=Bos tau | JBrowse |
| Lophelia pertusa | OS493_006063-T1 | KAJ7339656.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | Q96EQ9 Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus OX= | JBrowse |
| Lophelia pertusa | OS493_014069-T1 | KAJ7379665.1 | Histone-lysine N-methyltransferase prdm9 [Desmophyllum pertusum] | P0C6Y7 Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicu | JBrowse |
| Lophelia pertusa | OS493_014070-T1 | KAJ7379666.1 | hypothetical protein OS493_014070 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_029888-T1 | KAJ7325342.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | A6QPM3 Putative histone-lysine N-methyltransferase PRDM6 OS=Bos tau | JBrowse |
| Lophelia pertusa | OS493_031736-T1 | KAJ7382960.1 | Putative histone-lysine N-methyltransferase prdm6 [Desmophyllum pertusum] | Q9NQX0 Putative histone-lysine N-methyltransferase PRDM6 OS=Homo sa | JBrowse |
| Lophelia pertusa | OS493_036161-T1 | KAJ7382258.1 | hypothetical protein OS493_036161 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_036162-T1 | KAJ7382259.1 | Histone-lysine N-methyltransferase prdm9 [Desmophyllum pertusum] | P0C6Y7 Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicu | JBrowse |
