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Support counts the member genes carrying the term. % of genes is that count over all 2,126 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13710 | DNA HELICASE RECQ FAMILY MEMBER | 1739 / 2,126 | 81.8% | 99.7% of 1,744 | ≥80% support |
| GO | GO:0043138 Molecular Function | 3'-5' DNA helicase activity | 1741 / 2,126 | 81.9% | 96.1% of 1,811 | ≥80% support |
| GO | GO:0006281 Biological Process | DNA repair | 1741 / 2,126 | 81.9% | 96.1% of 1,811 | ≥80% support |
| GO | GO:0006310 Biological Process | DNA recombination | 1701 / 2,126 | 80.0% | 93.9% of 1,811 | ≥80% support |
| Pfam | PF00270 | DEAD | 1372 / 2,126 | 64.5% | 76.4% of 1,796 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 1362 / 2,126 | 64.1% | 75.8% of 1,796 | ≥50% support |
| Pfam | PF16124 | RecQ_Zn_bind — RecQ zinc-binding | 1251 / 2,126 | 58.8% | 69.7% of 1,796 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 1691 / 2,126 | 79.5% | 93.4% of 1,811 | ≥50% support |
| GO | GO:0005694 Cellular Component | chromosome | 1690 / 2,126 | 79.5% | 93.3% of 1,811 | ≥50% support |
| GO | GO:0009378 Molecular Function | four-way junction helicase activity | 1690 / 2,126 | 79.5% | 93.3% of 1,811 | ≥50% support |
| GO | GO:0032508 Biological Process | DNA duplex unwinding | 1690 / 2,126 | 79.5% | 93.3% of 1,811 | ≥50% support |
| GO | GO:0006268 Biological Process | DNA unwinding involved in DNA replication | 1535 / 2,126 | 72.2% | 84.8% of 1,811 | ≥50% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 1535 / 2,126 | 72.2% | 84.8% of 1,811 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1443 / 2,126 | 67.9% | 79.7% of 1,811 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 1372 / 2,126 | 64.5% | 75.8% of 1,811 | ≥50% support |
| GO | GO:0004386 Molecular Function | helicase activity | 1166 / 2,126 | 54.8% | 64.4% of 1,811 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 1155 / 2,126 | 54.3% | 63.8% of 1,811 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_001289-T1 | KAJ7387937.1 | hypothetical protein OS493_001289 [Desmophyllum pertusum] | Q9TXJ8 Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis ele | JBrowse |
| Lophelia pertusa | OS493_006908-T1 | KAJ7386874.1 | ATP-dependent DNA helicase sgs1 [Desmophyllum pertusum] | Q09811 ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces | JBrowse |
| Lophelia pertusa | OS493_006936-T1 | KAJ7386902.1 | hypothetical protein OS493_006936 [Desmophyllum pertusum] | P50729 Probable ATP-dependent DNA helicase RecS OS=Bacillus subtili | JBrowse |
| Lophelia pertusa | OS493_031426-T1 | KAJ7389457.1 | Recq3p [Desmophyllum pertusum] | Q6AYJ1 ATP-dependent DNA helicase Q1 OS=Rattus norvegicus OX=10116 | JBrowse |
| Lophelia pertusa | OS493_031770-T1 | KAJ7376891.1 | hypothetical protein OS493_031770 [Desmophyllum pertusum] | O88700 RecQ-like DNA helicase BLM OS=Mus musculus OX=10090 GN=Blm P | JBrowse |
| Lophelia pertusa | OS493_034072-T1 | KAJ7370143.1 | ATP-dependent DNA helicase Q5 [Desmophyllum pertusum] | D4ACP5 ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 | JBrowse |
| Lophelia pertusa | OS493_034079-T1 | KAJ7370150.1 | hypothetical protein OS493_034079 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_037655-T1 | KAJ7388430.1 | hypothetical protein OS493_037655 [Desmophyllum pertusum] | Q9FT72 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | JBrowse |
| Lophelia pertusa | OS493_037780-T1 | KAJ7350200.1 | hypothetical protein OS493_037780 [Desmophyllum pertusum] | Q9Z129 ATP-dependent DNA helicase Q1 OS=Mus musculus OX=10090 GN=Re | JBrowse |
| Lophelia pertusa | OS493_039752-T1 | KAJ7388111.1 | hypothetical protein OS493_039752 [Desmophyllum pertusum] | – | JBrowse |
