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Support counts the member genes carrying the term. % of genes is that count over all 1,738 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24240 | OPSIN | 1538 / 1,738 | 88.5% | 99.2% of 1,551 | ≥80% support |
| Pfam | PF00001 | 7tm_1 — 7 transmembrane receptor (rhodopsin family) | 1530 / 1,738 | 88.0% | 99.9% of 1,531 | ≥80% support |
| GO | GO:0007186 Biological Process | G protein-coupled receptor signaling pathway | 1552 / 1,738 | 89.3% | 99.9% of 1,554 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 1551 / 1,738 | 89.2% | 99.8% of 1,554 | ≥80% support |
| GO | GO:0004930 Molecular Function | G protein-coupled receptor activity | 1539 / 1,738 | 88.6% | 99.0% of 1,554 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 1537 / 1,738 | 88.4% | 98.9% of 1,554 | ≥80% support |
| GO | GO:0007602 Biological Process | phototransduction | 1535 / 1,738 | 88.3% | 98.8% of 1,554 | ≥80% support |
| GO | GO:0008020 Molecular Function | G protein-coupled photoreceptor activity | 1535 / 1,738 | 88.3% | 98.8% of 1,554 | ≥80% support |
| GO | GO:0071482 Biological Process | cellular response to light stimulus | 1535 / 1,738 | 88.3% | 98.8% of 1,554 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_015388-T1 | KAJ7372932.1 | hypothetical protein OS493_015388 [Desmophyllum pertusum] | O14718 Visual pigment-like receptor peropsin OS=Homo sapiens OX=960 | JBrowse |
| Lophelia pertusa | OS493_015389-T1 | KAJ7372933.1 | hypothetical protein OS493_015389 [Desmophyllum pertusum] | Q9H1Y3 Opsin-3 OS=Homo sapiens OX=9606 GN=OPN3 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_021449-T1 | KAJ7372021.1 | hypothetical protein OS493_021449 [Desmophyllum pertusum] | Q4U4D2 Melanopsin OS=Podarcis siculus OX=65484 GN=OPN4 PE=2 SV=2 | JBrowse |
| Lophelia pertusa | OS493_021450-T1 | KAJ7372022.1 | hypothetical protein OS493_021450 [Desmophyllum pertusum] | Q5XXP2 Melanopsin OS=Phodopus sungorus OX=10044 GN=OPN4 PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_022703-T1 | KAJ7330183.1 | hypothetical protein OS493_022703 [Desmophyllum pertusum] | O15974 Rhodopsin, G0-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Lophelia pertusa | OS493_025841-T1 | KAJ7371379.1 | hypothetical protein OS493_025841 [Desmophyllum pertusum] | Q4U4D2 Melanopsin OS=Podarcis siculus OX=65484 GN=OPN4 PE=2 SV=2 | JBrowse |
| Lophelia pertusa | OS493_031605-T1 | KAJ7353898.1 | Melanopsin [Desmophyllum pertusum] | Q5YKK9 Melanopsin OS=Felis catus OX=9685 GN=OPN4 PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_032731-T1 | KAJ7389263.1 | hypothetical protein OS493_032731 [Desmophyllum pertusum] | O57422 Melanopsin-B OS=Xenopus laevis OX=8355 GN=opn4b PE=2 SV=1 | JBrowse |
