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Support counts the member genes carrying the term. % of genes is that count over all 1,043 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24240 | OPSIN | 951 / 1,043 | 91.2% | 99.3% of 958 | ≥80% support |
| Pfam | PF00001 | 7tm_1 — 7 transmembrane receptor (rhodopsin family) | 923 / 1,043 | 88.5% | 100.0% of 923 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 961 / 1,043 | 92.1% | 100.0% of 961 | ≥80% support |
| GO | GO:0007186 Biological Process | G protein-coupled receptor signaling pathway | 958 / 1,043 | 91.9% | 99.7% of 961 | ≥80% support |
| GO | GO:0005887 Cellular Component | plasma membrane | 951 / 1,043 | 91.2% | 99.0% of 961 | ≥80% support |
| GO | GO:0007602 Biological Process | phototransduction | 951 / 1,043 | 91.2% | 99.0% of 961 | ≥80% support |
| GO | GO:0008020 Molecular Function | G protein-coupled photoreceptor activity | 951 / 1,043 | 91.2% | 99.0% of 961 | ≥80% support |
| GO | GO:0071482 Biological Process | cellular response to light stimulus | 951 / 1,043 | 91.2% | 99.0% of 961 | ≥80% support |
| GO | GO:0004930 Molecular Function | G protein-coupled receptor activity | 940 / 1,043 | 90.1% | 97.8% of 961 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_001816-T1 | KAJ7375084.1 | Melanopsin [Desmophyllum pertusum] | Q6XL69 Melanopsin OS=Rutilus rutilus OX=48668 GN=opn4 PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_004066-T1 | KAJ7387102.1 | hypothetical protein OS493_004066 [Desmophyllum pertusum] | O35214 Visual pigment-like receptor peropsin OS=Mus musculus OX=100 | JBrowse |
| Lophelia pertusa | OS493_007412-T1 | KAJ7374324.1 | hypothetical protein OS493_007412 [Desmophyllum pertusum] | P22331 Green-sensitive opsin-2 OS=Psalidodon fasciatus OX=223369 GN | JBrowse |
| Lophelia pertusa | OS493_009356-T1 | KAJ7374027.1 | hypothetical protein OS493_009356 [Desmophyllum pertusum] | P32310 Blue-sensitive opsin OS=Carassius auratus OX=7957 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_009357-T1 | KAJ7374028.1 | hypothetical protein OS493_009357 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_024174-T1 | KAJ7378225.1 | hypothetical protein OS493_024174 [Desmophyllum pertusum] | P28682 Blue-sensitive opsin OS=Gallus gallus OX=9031 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_030356-T1 | KAJ7383198.1 | hypothetical protein OS493_030356, partial [Desmophyllum pertusum] | Q804X9 Melanopsin-A OS=Gadus morhua OX=8049 GN=opn4a PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_032430-T1 | KAJ7389273.1 | hypothetical protein OS493_032430 [Desmophyllum pertusum] | P32310 Blue-sensitive opsin OS=Carassius auratus OX=7957 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_035598-T1 | KAJ7382321.1 | hypothetical protein OS493_035598, partial [Desmophyllum pertusum] | O15973 Rhodopsin, GQ-coupled OS=Mizuhopecten yessoensis OX=6573 GN= | JBrowse |
| Lophelia pertusa | OS493_040482-T1 | KAJ7367423.1 | hypothetical protein OS493_040482 [Desmophyllum pertusum] | – | JBrowse |
