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This orthogroup contains 957 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 957 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12369 | CHONDROITIN SYNTHASE | 827 / 957 | 86.4% | 99.8% of 829 | ≥80% support |
| Pfam | PF05679 | CHGN — Chondroitin N-acetylgalactosaminyltransferase | 797 / 957 | 83.3% | 95.6% of 834 | ≥80% support |
| GO | GO:0008376 Molecular Function | acetylgalactosaminyltransferase activity | 833 / 957 | 87.0% | 99.8% of 835 | ≥80% support |
| GO | GO:0030206 Biological Process | chondroitin sulfate biosynthetic process | 826 / 957 | 86.3% | 98.9% of 835 | ≥80% support |
| GO | GO:0047238 Molecular Function | glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity | 826 / 957 | 86.3% | 98.9% of 835 | ≥80% support |
| GO | GO:0032580 Cellular Component | Golgi cisterna membrane | 797 / 957 | 83.3% | 95.5% of 835 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_003698-T1 | KAJ7394025.1 | Chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Desmophyllum pertusum] | Q8TDX6 Chondroitin sulfate N-acetylgalactosaminyltransferase 1 OS=H | JBrowse |
| Lophelia pertusa | OS493_013949-T1 | KAJ7379558.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q6ZQ11 Chondroitin sulfate synthase 1 OS=Mus musculus OX=10090 GN=C | JBrowse |
| Lophelia pertusa | OS493_013954-T1 | KAJ7379562.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_013962-T1 | KAJ7379570.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_013963-T1 | KAJ7379571.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_014921-T1 | KAJ7391992.1 | Chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Desmophyllum pertusum] | Q8C1F4 Chondroitin sulfate N-acetylgalactosaminyltransferase 2 OS=M | JBrowse |
| Lophelia pertusa | OS493_018634-T1 | KAJ7384946.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_018635-T1 | KAJ7384947.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_018905-T1 | KAJ7372403.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_018906-T1 | KAJ7372404.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_018907-T1 | KAJ7372405.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_024537-T1 | KAJ7390505.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_036193-T1 | KAJ7369822.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q86X52 Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CH | JBrowse |
| Lophelia pertusa | OS493_036194-T1 | KAJ7369823.1 | Chondroitin sulfate synthase 1 [Desmophyllum pertusum] | Q7Z1Z1 Chondroitin sulfate synthase sqv-5 OS=Caenorhabditis elegans | JBrowse |
