In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_007310-T1 | CAD5122448.1 | DgyrCDS10873 [Dimorphilus gyrociliatus] | O35350 Calpain-1 catalytic subunit OS=Mus musculus OX=10090 GN=Capn | JBrowse |
| Lophelia pertusa | OS493_007489-T1 | XP_052766139.1 | calpain-B-like isoform X7 [Mya arenaria] | Q9D805 Calpain-9 OS=Mus musculus OX=10090 GN=Capn9 PE=2 SV=2 | JBrowse |
| Lophelia pertusa | OS493_007490-T1 | XP_021353799.1 | calpain-A-like isoform X9 [Mizuhopecten yessoensis] | O35920 Calpain-9 OS=Rattus norvegicus OX=10116 GN=Capn9 PE=2 SV=2 | JBrowse |
| Lophelia pertusa | OS493_007491-T1 | GFU61671.1 | calpain-B [Nephila pilipes] | – | JBrowse |
| Lophelia pertusa | OS493_028644-T1 | XP_014664552.1 | PREDICTED: calpain-5-like isoform X1 [Priapulus caudatus] | O15484 Calpain-5 OS=Homo sapiens OX=9606 GN=CAPN5 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_028645-T1 | KAI0237550.1 | Calpain-5 [Lamellibrachia satsuma] | O08688 Calpain-5 OS=Mus musculus OX=10090 GN=Capn5 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_028693-T1 | XP_038642930.1 | calpain-5-like [Scyliorhinus canicula] | Q8R4C0 Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_028694-T1 | NXI34490.1 | CAN5 protein [Galbula dea] | Q8R4C0 Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_028695-T1 | GFW90652.1 | calpain-5 [Trichonephila clavipes] | – | JBrowse |
