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This orthogroup contains 763 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 763 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00086 | Thyroglobulin_1 — Thyroglobulin type-1 repeat | 643 / 763 | 84.3% | 97.3% of 661 | ≥80% support |
| GO | GO:0005615 Cellular Component | extracellular space | 620 / 763 | 81.3% | 95.7% of 648 | ≥80% support |
| PANTHER | PTHR12352 | SECRETED MODULAR CALCIUM-BINDING PROTEIN | 609 / 763 | 79.8% | 96.1% of 634 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_004677-T1 | KAJ7381079.1 | Nidogen-2 [Desmophyllum pertusum] | P06882 Thyroglobulin OS=Rattus norvegicus OX=10116 GN=Tg PE=1 SV=4 | JBrowse |
| Lophelia pertusa | OS493_004678-T1 | KAJ7381080.1 | cd74 molecule, major histocompatibility complex, class II invariant chain a, partial [Desmophyllum pertusum] | P01267 Thyroglobulin OS=Bos taurus OX=9913 GN=TG PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_004679-T1 | KAJ7381081.1 | hypothetical protein OS493_004679, partial [Desmophyllum pertusum] | B5DFC9 Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_004687-T1 | KAJ7381089.1 | hypothetical protein OS493_004687 [Desmophyllum pertusum] | P81439 Equistatin OS=Actinia equina OX=6106 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_013659-T1 | KAJ7392279.1 | hypothetical protein OS493_013659 [Desmophyllum pertusum] | P81439 Equistatin OS=Actinia equina OX=6106 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_013660-T1 | KAJ7392280.1 | hypothetical protein OS493_013660 [Desmophyllum pertusum] | P81439 Equistatin OS=Actinia equina OX=6106 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_026976-T1 | KAJ7356053.1 | hypothetical protein OS493_026976, partial [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_026977-T1 | KAJ7356054.1 | hypothetical protein OS493_026977 [Desmophyllum pertusum] | P81439 Equistatin OS=Actinia equina OX=6106 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_026986-T1 | KAJ7356063.1 | Nidogen-2 [Desmophyllum pertusum] | P81439 Equistatin OS=Actinia equina OX=6106 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_026987-T1 | KAJ7356064.1 | hypothetical protein OS493_026987 [Desmophyllum pertusum] | P62811 WAP four-disulfide core domain protein 18 OS=Bos taurus OX=9 | JBrowse |
| Lophelia pertusa | OS493_026988-T1 | KAJ7356065.1 | hypothetical protein OS493_026988 [Desmophyllum pertusum] | P04441 H-2 class II histocompatibility antigen gamma chain OS=Mus m | JBrowse |
| Lophelia pertusa | OS493_026989-T1 | KAJ7356066.1 | cd74 molecule, major histocompatibility complex, class II invariant chain a [Desmophyllum pertusum] | P81439 Equistatin OS=Actinia equina OX=6106 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_026990-T1 | KAJ7356067.1 | hypothetical protein OS493_026990 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_026999-T1 | KAJ7356074.1 | hypothetical protein OS493_026999 [Desmophyllum pertusum] | – | JBrowse |
