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Support counts the member genes carrying the term. % of genes is that count over all 750 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 606 / 750 | 80.8% | 88.7% of 683 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 660 / 750 | 88.0% | 100.0% of 660 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 653 / 750 | 87.1% | 98.9% of 660 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 619 / 750 | 82.5% | 93.8% of 660 | ≥80% support |
| PANTHER | PTHR24027 | CADHERIN-23 | 499 / 750 | 66.5% | 74.2% of 673 | ≥50% support |
| Pfam | PF02210 | Laminin_G_2 — Laminin G domain | 488 / 750 | 65.1% | 71.5% of 683 | ≥50% support |
| GO | GO:0007155 Biological Process | cell adhesion | 572 / 750 | 76.3% | 86.7% of 660 | ≥50% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 564 / 750 | 75.2% | 85.5% of 660 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 545 / 750 | 72.7% | 82.6% of 660 | ≥50% support |
| GO | GO:0016342 Cellular Component | catenin complex | 496 / 750 | 66.1% | 75.2% of 660 | ≥50% support |
| GO | GO:0045296 Molecular Function | cadherin binding | 496 / 750 | 66.1% | 75.2% of 660 | ≥50% support |
| GO | GO:0098742 Biological Process | cell-cell adhesion via plasma-membrane adhesion molecules | 496 / 750 | 66.1% | 75.2% of 660 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_018671-T1 | KAJ7384982.1 | hypothetical protein OS493_018671 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_018674-T1 | KAJ7384985.1 | hypothetical protein OS493_018674 [Desmophyllum pertusum] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Lophelia pertusa | OS493_018676-T1 | KAJ7384987.1 | hypothetical protein OS493_018676 [Desmophyllum pertusum] | Q8BNA6 Protocadherin Fat 3 OS=Mus musculus OX=10090 GN=Fat3 PE=1 SV | JBrowse |
| Lophelia pertusa | OS493_018677-T1 | KAJ7384988.1 | beta-catenin binding [Desmophyllum pertusum] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Lophelia pertusa | OS493_018678-T1 | KAJ7384989.1 | beta-catenin binding [Desmophyllum pertusum] | B8V7Q1 Protocadherin-like protein OS=Acropora millepora OX=45264 PE | JBrowse |
| Lophelia pertusa | OS493_018679-T1 | KAJ7384990.1 | beta-catenin binding [Desmophyllum pertusum] | B8V7Q1 Protocadherin-like protein OS=Acropora millepora OX=45264 PE | JBrowse |
| Lophelia pertusa | OS493_018680-T1 | KAJ7384991.1 | beta-catenin binding [Desmophyllum pertusum] | B8V7Q1 Protocadherin-like protein OS=Acropora millepora OX=45264 PE | JBrowse |
| Lophelia pertusa | OS493_020615-T1 | KAJ7372186.1 | bahd acyltransferase [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_020616-T1 | KAJ7372187.1 | bahd acyltransferase [Desmophyllum pertusum] | B8V7Q1 Protocadherin-like protein OS=Acropora millepora OX=45264 PE | JBrowse |
