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This orthogroup contains 619 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 619 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47981 | RAB FAMILY | 517 / 619 | 83.5% | 98.1% of 527 | ≥80% support |
| Pfam | PF00071 | Ras | 527 / 619 | 85.1% | 99.6% of 529 | ≥80% support |
| GO | GO:0003924 Molecular Function | GTPase activity | 527 / 619 | 85.1% | 99.4% of 530 | ≥80% support |
| GO | GO:0005525 Molecular Function | GTP binding | 527 / 619 | 85.1% | 99.4% of 530 | ≥80% support |
| GO | GO:0005764 Cellular Component | lysosome | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0005770 Cellular Component | late endosome | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0045335 Cellular Component | phagocytic vesicle | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0090385 Biological Process | phagosome-lysosome fusion | 517 / 619 | 83.5% | 97.6% of 530 | ≥80% support |
| GO | GO:0008333 Biological Process | endosome to lysosome transport | 516 / 619 | 83.4% | 97.4% of 530 | ≥80% support |
| GO | GO:0005802 Cellular Component | trans-Golgi network | 331 / 619 | 53.5% | 62.5% of 530 | ≥50% support |
| GO | GO:0005794 Cellular Component | Golgi apparatus | 322 / 619 | 52.0% | 60.8% of 530 | ≥50% support |
| GO | GO:0016192 Biological Process | vesicle-mediated transport | 322 / 619 | 52.0% | 60.8% of 530 | ≥50% support |
| GO | GO:0031982 Cellular Component | vesicle | 322 / 619 | 52.0% | 60.8% of 530 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_020010-T1 | KAJ7331228.1 | multi-organism toxin transport [Desmophyllum pertusum] | Q91YQ1 Ras-related protein Rab-7L1 OS=Mus musculus OX=10090 GN=Rab2 | JBrowse |
| Lophelia pertusa | OS493_029511-T1 | KAJ7325647.1 | rab32, member RAS oncoprotein [Desmophyllum pertusum] | P57729 Ras-related protein Rab-38 OS=Homo sapiens OX=9606 GN=RAB38 | JBrowse |
| Lophelia pertusa | OS493_037846-T1 | KAJ7388399.1 | rab32, member RAS oncoprotein [Desmophyllum pertusum] | O14966 Ras-related protein Rab-7L1 OS=Homo sapiens OX=9606 GN=RAB29 | JBrowse |
| Lophelia pertusa | OS493_037852-T1 | KAJ7388405.1 | rab32, member RAS oncoprotein [Desmophyllum pertusum] | Q55E31 Ras-related protein Rab-32B OS=Dictyostelium discoideum OX=4 | JBrowse |
