In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_022767-T1 | XP_027036032.1 | fibrocystin-L-like [Pocillopora damicornis] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Lophelia pertusa | OS493_022768-T1 | XP_031552798.1 | fibrocystin-L-like [Actinia tenebrosa] | Q80ZA4 Fibrocystin-L OS=Mus musculus OX=10090 GN=Pkhd1l1 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_022769-T1 | CAH3156418.1 | unnamed protein product [Pocillopora meandrina] | P08F94 Fibrocystin OS=Homo sapiens OX=9606 GN=PKHD1 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_022772-T1 | XP_038070547.1 | fibrocystin-L-like isoform X2 [Patiria miniata] | E2RK30 Fibrocystin OS=Canis lupus familiaris OX=9615 GN=PKHD1 PE=3 | JBrowse |
| Lophelia pertusa | OS493_022773-T1 | XP_038070546.1 | fibrocystin-L-like isoform X1 [Patiria miniata] | P08F94 Fibrocystin OS=Homo sapiens OX=9606 GN=PKHD1 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_022774-T1 | XP_030203618.1 | LOW QUALITY PROTEIN: fibrocystin-L [Gadus morhua] | E2RK30 Fibrocystin OS=Canis lupus familiaris OX=9615 GN=PKHD1 PE=3 | JBrowse |
| Lophelia pertusa | OS493_040582-T1 | CAH3168052.1 | unnamed protein product [Porites evermanni] | – | JBrowse |
