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This orthogroup contains 482 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 482 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45797 | RAD54-LIKE | 414 / 482 | 85.9% | 98.3% of 421 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 421 / 482 | 87.3% | 100.0% of 421 | ≥80% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 414 / 482 | 85.9% | 98.3% of 421 | ≥80% support |
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 380 / 482 | 78.8% | 94.1% of 404 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 347 / 482 | 72.0% | 85.9% of 404 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 380 / 482 | 78.8% | 90.3% of 421 | ≥50% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 380 / 482 | 78.8% | 90.3% of 421 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_008164-T1 | KAJ7392924.1 | hypothetical protein OS493_008164 [Desmophyllum pertusum] | P46100 Transcriptional regulator ATRX OS=Homo sapiens OX=9606 GN=AT | JBrowse |
| Lophelia pertusa | OS493_008165-T1 | KAJ7392925.1 | hypothetical protein OS493_008165 [Desmophyllum pertusum] | Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=A | JBrowse |
| Lophelia pertusa | OS493_008166-T1 | KAJ7392926.1 | hypothetical protein OS493_008166 [Desmophyllum pertusum] | Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=A | JBrowse |
| Lophelia pertusa | OS493_029466-T1 | KAJ7354905.1 | hypothetical protein OS493_029466 [Desmophyllum pertusum] | A4IHD2 Helicase ARIP4 OS=Xenopus tropicalis OX=8364 GN=rad54l2 PE=2 | JBrowse |
| Lophelia pertusa | OS493_029468-T1 | KAJ7354906.1 | hypothetical protein OS493_029468 [Desmophyllum pertusum] | Q9Y4B4 Helicase ARIP4 OS=Homo sapiens OX=9606 GN=RAD54L2 PE=1 SV=4 | JBrowse |
| Lophelia pertusa | OS493_029469-T1 | KAJ7354907.1 | hypothetical protein OS493_029469 [Desmophyllum pertusum] | A4IHD2 Helicase ARIP4 OS=Xenopus tropicalis OX=8364 GN=rad54l2 PE=2 | JBrowse |
| Lophelia pertusa | OS493_036611-T1 | KAJ7382178.1 | hypothetical protein OS493_036611 [Desmophyllum pertusum] | P82798 Transcriptional regulator ATRX (Fragment) OS=Notamacropus eu | JBrowse |
| Lophelia pertusa | OS493_036612-T1 | KAJ7382179.1 | hypothetical protein OS493_036612 [Desmophyllum pertusum] | Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=A | JBrowse |
| Lophelia pertusa | OS493_036613-T1 | KAJ7382180.1 | hypothetical protein OS493_036613 [Desmophyllum pertusum] | Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=A | JBrowse |
