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Support counts the member genes carrying the term. % of genes is that count over all 472 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13326 | TRNA PSEUDOURIDINE SYNTHASE D | 421 / 472 | 89.2% | 99.8% of 422 | ≥80% support |
| Pfam | PF01142 | TruD | 388 / 472 | 82.2% | 100.0% of 388 | ≥80% support |
| GO | GO:0001522 Biological Process | pseudouridine synthesis | 424 / 472 | 89.8% | 100.0% of 424 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 424 / 472 | 89.8% | 100.0% of 424 | ≥80% support |
| GO | GO:0009451 Biological Process | RNA modification | 424 / 472 | 89.8% | 100.0% of 424 | ≥80% support |
| GO | GO:0009982 Molecular Function | pseudouridine synthase activity | 424 / 472 | 89.8% | 100.0% of 424 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 392 / 472 | 83.1% | 92.5% of 424 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_018206-T1 | KAJ7333037.1 | pseudouridine synthase [Desmophyllum pertusum] | Q1L8I0 Pseudouridylate synthase PUS7L OS=Danio rerio OX=7955 GN=pus | JBrowse |
| Lophelia pertusa | OS493_018207-T1 | KAJ7333038.1 | hypothetical protein OS493_018207 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_022949-T1 | KAJ7378415.1 | multisubstrate pseudouridine synthase 7 [Desmophyllum pertusum] | Q08DI8 Pseudouridylate synthase 7 homolog OS=Bos taurus OX=9913 GN= | JBrowse |
| Lophelia pertusa | OS493_022950-T1 | KAJ7378416.1 | multisubstrate pseudouridine synthase 7 [Desmophyllum pertusum] | Q08DI8 Pseudouridylate synthase 7 homolog OS=Bos taurus OX=9913 GN= | JBrowse |
