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This orthogroup contains 407 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 407 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45799 | RETICULON-LIKE PROTEIN | 355 / 407 | 87.2% | 99.4% of 357 | ≥80% support |
| Pfam | PF02453 | Reticulon | 358 / 407 | 88.0% | 99.7% of 359 | ≥80% support |
| GO | GO:0005789 Cellular Component | endoplasmic reticulum membrane | 355 / 407 | 87.2% | 99.4% of 357 | ≥80% support |
| GO | GO:0030424 Cellular Component | axon | 300 / 407 | 73.7% | 84.0% of 357 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_020282-T1 | KAJ7384699.1 | Reticulon-like protein [Desmophyllum pertusum] | Q6IFY7 Reticulon-1-A OS=Xenopus laevis OX=8355 GN=rtn1-a PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_029900-T1 | KAJ7325352.1 | hypothetical protein OS493_029900 [Desmophyllum pertusum] | Q08D83 Reticulon-3 OS=Bos taurus OX=9913 GN=RTN3 PE=2 SV=1 | JBrowse |
