In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_000951-T1 | CAB3990875.1 | Nucleo TPR [Paramuricea clavata] | F6ZDS4 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_000952-T1 | XP_048581841.1 | nucleoprotein TPR isoform X1 [Nematostella vectensis] | F6ZDS4 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_000953-T1 | XP_048587430.1 | uncharacterized protein LOC125570195 [Nematostella vectensis] | P12270 Nucleoprotein TPR OS=Homo sapiens OX=9606 GN=TPR PE=1 SV=3 | JBrowse |
| Lophelia pertusa | OS493_000954-T1 | XP_029191499.2 | nucleoprotein TPR-like isoform X1 [Acropora millepora] | – | JBrowse |
| Lophelia pertusa | OS493_040594-T1 | XP_041484562.1 | nucleoprotein TPR-like isoform X2 [Lytechinus variegatus] | F1MA98 Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 | JBrowse |
