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This orthogroup contains 365 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 365 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13402 | RGPR-RELATED | 281 / 365 | 77.0% | 99.7% of 282 | ≥50% support |
| Pfam | PF12931 | Sec16_C — Sec23-binding domain of Sec16 | 272 / 365 | 74.5% | 99.3% of 274 | ≥50% support |
| GO | GO:0006914 Biological Process | autophagy | 281 / 365 | 77.0% | 99.7% of 282 | ≥50% support |
| GO | GO:0048208 Biological Process | COPII vesicle coating | 281 / 365 | 77.0% | 99.7% of 282 | ≥50% support |
| GO | GO:0007030 Biological Process | Golgi organization | 280 / 365 | 76.7% | 99.3% of 282 | ≥50% support |
| GO | GO:0012507 Cellular Component | ER to Golgi transport vesicle membrane | 280 / 365 | 76.7% | 99.3% of 282 | ≥50% support |
| GO | GO:0070971 Cellular Component | endoplasmic reticulum exit site | 280 / 365 | 76.7% | 99.3% of 282 | ≥50% support |
| GO | GO:0070973 Biological Process | protein localization to endoplasmic reticulum exit site | 280 / 365 | 76.7% | 99.3% of 282 | ≥50% support |
| KEGG | K20353 | SEC16 — Membrane trafficking | 247 / 365 | 67.7% | 99.6% of 248 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_014825-T1 | KAJ7334503.1 | Protein transport protein Sec16A [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_014826-T1 | KAJ7334504.1 | Protein transport protein Sec16A [Desmophyllum pertusum] | O15027 Protein transport protein Sec16A OS=Homo sapiens OX=9606 GN= | JBrowse |
| Lophelia pertusa | OS493_014827-T1 | KAJ7334505.1 | hypothetical protein OS493_014827 [Desmophyllum pertusum] | – | JBrowse |
