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Support counts the member genes carrying the term. % of genes is that count over all 362 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11685 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 299 / 362 | 82.6% | 97.7% of 306 | ≥80% support |
| Pfam | PF01485 | IBR | 298 / 362 | 82.3% | 94.0% of 317 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 302 / 362 | 83.4% | 99.7% of 303 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 300 / 362 | 82.9% | 99.0% of 303 | ≥80% support |
| GO | GO:0000151 Cellular Component | ubiquitin ligase complex | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0000209 Biological Process | protein polyubiquitination | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0006511 Biological Process | ubiquitin-dependent protein catabolic process | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0031624 Molecular Function | ubiquitin conjugating enzyme binding | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0032436 Biological Process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 299 / 362 | 82.6% | 98.7% of 303 | ≥80% support |
| Pfam | PF19422 | Ariadne | 289 / 362 | 79.8% | 91.2% of 317 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_002602-T1 | KAJ7365879.1 | E3 ubiquitin-protein ligase arih1 [Desmophyllum pertusum] | B1H1E4 E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis OX=8 | JBrowse |
| Lophelia pertusa | OS493_034772-T1 | KAJ7351868.1 | E3 ubiquitin-protein ligase arih2 [Desmophyllum pertusum] | Q9Z1K6 E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus OX=10090 G | JBrowse |
