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This orthogroup contains 320 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 320 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR31431 | NUCLEOPORIN NUP188 HOMOLOG | 269 / 320 | 84.1% | 99.3% of 271 | ≥80% support |
| GO | GO:0006405 Biological Process | RNA export from nucleus | 269 / 320 | 84.1% | 99.3% of 271 | ≥80% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 269 / 320 | 84.1% | 99.3% of 271 | ≥80% support |
| GO | GO:0017056 Molecular Function | structural constituent of nuclear pore | 269 / 320 | 84.1% | 99.3% of 271 | ≥80% support |
| GO | GO:0044611 Cellular Component | nuclear pore inner ring | 269 / 320 | 84.1% | 99.3% of 271 | ≥80% support |
| Pfam | PF21093 | Nup188_N-subdom_III — Nucleoporin Nup188, N-terminal subdomain III | 196 / 320 | 61.3% | 87.1% of 225 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_000282-T1 | KAJ7394471.1 | hypothetical protein OS493_000282 [Desmophyllum pertusum] | Q5SRE5 Nucleoporin NUP188 OS=Homo sapiens OX=9606 GN=NUP188 PE=1 SV | JBrowse |
