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This orthogroup contains 318 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 318 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11946 | VALYL-TRNA SYNTHETASES | 282 / 318 | 88.7% | 100.0% of 282 | ≥80% support |
| Pfam | PF00133 | tRNA-synt_1 — tRNA synthetases class I (I, L, M and V) | 270 / 318 | 84.9% | 95.4% of 283 | ≥80% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 285 / 318 | 89.6% | 100.0% of 285 | ≥80% support |
| GO | GO:0004832 Molecular Function | valine-tRNA ligase activity | 283 / 318 | 89.0% | 99.3% of 285 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 283 / 318 | 89.0% | 99.3% of 285 | ≥80% support |
| GO | GO:0006438 Biological Process | valyl-tRNA aminoacylation | 283 / 318 | 89.0% | 99.3% of 285 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 282 / 318 | 88.7% | 99.0% of 285 | ≥80% support |
| GO | GO:0004812 Molecular Function | aminoacyl-tRNA ligase activity | 281 / 318 | 88.4% | 98.6% of 285 | ≥80% support |
| GO | GO:0006418 Biological Process | tRNA aminoacylation for protein translation | 281 / 318 | 88.4% | 98.6% of 285 | ≥80% support |
| Pfam | PF08264 | Anticodon_1 — Anticodon-binding domain of tRNA ligase | 244 / 318 | 76.7% | 86.2% of 283 | ≥50% support |
| GO | GO:0002161 Molecular Function | aminoacyl-tRNA editing activity | 244 / 318 | 76.7% | 85.6% of 285 | ≥50% support |
| KEGG | K01873 | VARS, valS — Transfer RNA biogenesis | 218 / 318 | 68.6% | 99.1% of 220 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_029321-T1 | KAJ7377421.1 | Valine--tRNA ligase, partial [Desmophyllum pertusum] | P49696 Valine--tRNA ligase OS=Takifugu rubripes OX=31033 GN=vars1 P | JBrowse |
| Lophelia pertusa | OS493_029322-T1 | KAJ7377422.1 | Valine--tRNA ligase [Desmophyllum pertusum] | Q9Z1Q9 Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 S | JBrowse |
| Lophelia pertusa | OS493_029323-T1 | KAJ7377423.1 | hypothetical protein OS493_029323 [Desmophyllum pertusum] | P49696 Valine--tRNA ligase OS=Takifugu rubripes OX=31033 GN=vars1 P | JBrowse |
