← Back to the gene family browser
This orthogroup contains 305 genes from 139 species (306 sequences — 1 extra sequences share a gene identifier with another member, so they are not counted twice). The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 305 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15720 | GREB1-RELATED | 256 / 305 | 83.9% | 99.6% of 257 | ≥80% support |
| GO | GO:0007275 Biological Process | multicellular organism development | 256 / 305 | 83.9% | 99.6% of 257 | ≥80% support |
| Pfam | PF20692 | cpSF2-GREB1 — Circularly permuted SF2 helicase found in GREB1 proteins | 229 / 305 | 75.1% | 89.1% of 257 | ≥50% support |
| Pfam | PF20691 | TAGT — TET-Associated Glycosyltransferase | 216 / 305 | 70.8% | 84.1% of 257 | ≥50% support |
| Pfam | PF15782 | GREB1_N — GREB1 N-terminal domain | 208 / 305 | 68.2% | 80.9% of 257 | ≥50% support |
| Pfam | PF20267 | GREB1_C — GREB1 C-terminal region | 202 / 305 | 66.2% | 78.6% of 257 | ≥50% support |
| Pfam | PF20688 | GREB1_2nd — GREB1, second domain | 196 / 305 | 64.3% | 76.3% of 257 | ≥50% support |
| KEGG | K27478 | GREB1L — Signaling proteins | 184 / 305 | 60.3% | 96.3% of 191 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_000862-T1 | KAJ7387531.1 | hypothetical protein OS493_000862 [Desmophyllum pertusum] | Q3UHK3 Protein GREB1 OS=Mus musculus OX=10090 GN=Greb1 PE=2 SV=2 | JBrowse |
| Lophelia pertusa | OS493_000863-T1 | KAJ7387532.1 | hypothetical protein OS493_000863 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_000864-T1 | KAJ7387533.1 | hypothetical protein OS493_000864 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_000866-T1 | KAJ7387535.1 | hypothetical protein OS493_000866 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_000867-T1 | KAJ7387536.1 | GREB1-like protein [Desmophyllum pertusum] | Q9C091 GREB1-like protein OS=Homo sapiens OX=9606 GN=GREB1L PE=1 SV | JBrowse |
| Lophelia pertusa | OS493_000868-T1 | KAJ7387537.1 | GREB1-like protein [Desmophyllum pertusum] | B9EJV3 GREB1-like protein OS=Mus musculus OX=10090 GN=Greb1l PE=2 S | JBrowse |
| Lophelia pertusa | OS493_000869-T1 | KAJ7387538.1 | GREB1-like protein [Desmophyllum pertusum] | B9EJV3 GREB1-like protein OS=Mus musculus OX=10090 GN=Greb1l PE=2 S | JBrowse |
