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Support counts the member genes carrying the term. % of genes is that count over all 301 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11390 | PROKARYOTIC DNA TOPOISOMERASE | 253 / 301 | 84.1% | 96.2% of 263 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 255 / 301 | 84.7% | 94.8% of 269 | ≥80% support |
| GO | GO:0003916 Molecular Function | DNA topoisomerase activity | 255 / 301 | 84.7% | 94.8% of 269 | ≥80% support |
| GO | GO:0006265 Biological Process | DNA topological change | 255 / 301 | 84.7% | 94.8% of 269 | ≥80% support |
| GO | GO:0003917 Molecular Function | DNA topoisomerase type I (single strand cut, ATP-independent) activity | 253 / 301 | 84.1% | 94.1% of 269 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 253 / 301 | 84.1% | 94.1% of 269 | ≥80% support |
| Pfam | PF01131 | Topoisom_bac — DNA topoisomerase | 235 / 301 | 78.1% | 88.4% of 266 | ≥50% support |
| Pfam | PF06839 | zf-GRF — GRF zinc finger | 205 / 301 | 68.1% | 77.1% of 266 | ≥50% support |
| Pfam | PF01751 | Toprim | 193 / 301 | 64.1% | 72.6% of 266 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 206 / 301 | 68.4% | 76.6% of 269 | ≥50% support |
| KEGG | K03165 | TOP3 — DNA repair and recombination proteins | 187 / 301 | 62.1% | 99.5% of 188 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_003237-T1 | KAJ7340487.1 | DNA topoisomerase 3-alpha [Desmophyllum pertusum] | Q9NG98 DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 | JBrowse |
| Lophelia pertusa | OS493_003238-T1 | KAJ7340488.1 | DNA topoisomerase 3-alpha [Desmophyllum pertusum] | O70157 DNA topoisomerase 3-alpha OS=Mus musculus OX=10090 GN=Top3a | JBrowse |
| Lophelia pertusa | OS493_003239-T1 | KAJ7340489.1 | hypothetical protein OS493_003239 [Desmophyllum pertusum] | O70157 DNA topoisomerase 3-alpha OS=Mus musculus OX=10090 GN=Top3a | JBrowse |
