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This orthogroup contains 290 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 290 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12069 | DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 | 237 / 290 | 81.7% | 99.2% of 239 | ≥80% support |
| Pfam | PF04801 | RPC5 | 240 / 290 | 82.8% | 95.6% of 251 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 242 / 290 | 83.5% | 100.0% of 242 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 241 / 290 | 83.1% | 99.6% of 242 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 237 / 290 | 81.7% | 97.9% of 242 | ≥80% support |
| GO | GO:0042797 Biological Process | tRNA transcription by RNA polymerase III | 237 / 290 | 81.7% | 97.9% of 242 | ≥80% support |
| Pfam | PF19725 | RPC5_C — DNA-directed RNA polymerase III subunit RPC5 C-terminal | 181 / 290 | 62.4% | 72.1% of 251 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_013082-T1 | KAJ7361996.1 | DNA-directed RNA polymerase III subunit RPC5 [Desmophyllum pertusum] | Q9CZT4 DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus | JBrowse |
