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This orthogroup contains 288 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 288 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR43977 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 | 252 / 288 | 87.5% | 99.6% of 253 | ≥80% support |
| GO | GO:0003690 Molecular Function | double-stranded DNA binding | 252 / 288 | 87.5% | 99.6% of 253 | ≥80% support |
| GO | GO:0007064 Biological Process | mitotic sister chromatid cohesion | 252 / 288 | 87.5% | 99.6% of 253 | ≥80% support |
| GO | GO:0034990 Cellular Component | mitotic cohesin complex | 252 / 288 | 87.5% | 99.6% of 253 | ≥80% support |
| GO | GO:0061775 Molecular Function | cohesin loader activity | 252 / 288 | 87.5% | 99.6% of 253 | ≥80% support |
| Pfam | PF02463 | SMC_N — RecF/RecN/SMC N terminal domain | 221 / 288 | 76.7% | 94.0% of 235 | ≥50% support |
| Pfam | PF06470 | SMC_hinge — SMC proteins Flexible Hinge Domain | 191 / 288 | 66.3% | 81.3% of 235 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 216 / 288 | 75.0% | 85.4% of 253 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 199 / 288 | 69.1% | 78.7% of 253 | ≥50% support |
| GO | GO:0005694 Cellular Component | chromosome | 199 / 288 | 69.1% | 78.7% of 253 | ≥50% support |
| GO | GO:0051276 Biological Process | chromosome organization | 199 / 288 | 69.1% | 78.7% of 253 | ≥50% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 177 / 288 | 61.5% | 70.0% of 253 | ≥50% support |
| KEGG | K06669 | SMC3, CSPG6 — Proteoglycans | 164 / 288 | 56.9% | 97.0% of 169 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_015229-T1 | KAJ7385638.1 | Structural maintenance of chromosomes protein 3 [Desmophyllum pertusum] | O93309 Structural maintenance of chromosomes protein 3 OS=Xenopus l | JBrowse |
