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Support counts the member genes carrying the term. % of genes is that count over all 279 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12412 | CAP BINDING PROTEIN | 250 / 279 | 89.6% | 100.0% of 250 | ≥80% support |
| GO | GO:0000184 Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 250 / 279 | 89.6% | 99.2% of 252 | ≥80% support |
| GO | GO:0000339 Molecular Function | RNA cap binding | 250 / 279 | 89.6% | 99.2% of 252 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 250 / 279 | 89.6% | 99.2% of 252 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 250 / 279 | 89.6% | 99.2% of 252 | ≥80% support |
| GO | GO:0005845 Cellular Component | obsolete mRNA cap binding complex | 250 / 279 | 89.6% | 99.2% of 252 | ≥80% support |
| GO | GO:0005846 Cellular Component | nuclear cap binding complex | 250 / 279 | 89.6% | 99.2% of 252 | ≥80% support |
| GO | GO:0006406 Biological Process | mRNA export from nucleus | 250 / 279 | 89.6% | 99.2% of 252 | ≥80% support |
| GO | GO:0016070 Biological Process | RNA metabolic process | 233 / 279 | 83.5% | 92.5% of 252 | ≥80% support |
| Pfam | PF09090 | MIF4G_like_2 — MIF4G like | 216 / 279 | 77.4% | 87.5% of 247 | ≥50% support |
| Pfam | PF09088 | MIF4G_like — MIF4G like | 202 / 279 | 72.4% | 81.8% of 247 | ≥50% support |
| Pfam | PF02854 | MIF4G | 191 / 279 | 68.5% | 77.3% of 247 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 191 / 279 | 68.5% | 75.8% of 252 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 191 / 279 | 68.5% | 75.8% of 252 | ≥50% support |
| KEGG | K12882 | NCBP1, CBP80 — Spliceosome | 172 / 279 | 61.7% | 98.3% of 175 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_031917-T1 | KAJ7389388.1 | Nuclear cap-binding protein subunit 1 [Desmophyllum pertusum] | Q5ZJZ6 Nuclear cap-binding protein subunit 1 OS=Gallus gallus OX=90 | JBrowse |
