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This orthogroup contains 272 genes from 133 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 272 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR48051 | - | 181 / 272 | 66.5% | 82.3% of 220 | ≥50% support |
| Pfam | PF13920 | zf-C3HC4_3 — Zinc finger, C3HC4 type (RING finger) | 195 / 272 | 71.7% | 86.7% of 225 | ≥50% support |
| Pfam | PF00536 | SAM_1 — SAM domain (Sterile alpha motif) | 167 / 272 | 61.4% | 74.2% of 225 | ≥50% support |
| Pfam | PF13855 | LRR_8 — Leucine rich repeat | 159 / 272 | 58.5% | 70.7% of 225 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 217 / 272 | 79.8% | 99.5% of 218 | ≥50% support |
| KEGG | K10641 | LRSAM1 — Ubiquitin system | 168 / 272 | 61.8% | 98.3% of 171 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_014654-T1 | KAJ7334344.1 | E3 ubiquitin-protein ligase lrsam1 [Desmophyllum pertusum] | Q80ZI6 E3 ubiquitin-protein ligase LRSAM1 OS=Mus musculus OX=10090 | JBrowse |
| Lophelia pertusa | OS493_014655-T1 | KAJ7334345.1 | E3 ubiquitin-protein ligase lrsam1 [Desmophyllum pertusum] | Q6UWE0 E3 ubiquitin-protein ligase LRSAM1 OS=Homo sapiens OX=9606 G | JBrowse |
