← Back to the gene family browser
This orthogroup contains 268 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 268 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10528 | AF4/FMR2 FAMILY MEMBER | 216 / 268 | 80.6% | 100.0% of 216 | ≥80% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 216 / 268 | 80.6% | 99.1% of 218 | ≥80% support |
| GO | GO:0032783 Cellular Component | super elongation complex | 216 / 268 | 80.6% | 99.1% of 218 | ≥80% support |
| Pfam | PF18876 | AFF4_CHD — AFF4, C-terminal homology domain | 203 / 268 | 75.8% | 91.9% of 221 | ≥50% support |
| Pfam | PF05110 | AF-4 | 156 / 268 | 58.2% | 70.6% of 221 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 203 / 268 | 75.8% | 93.1% of 218 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_027326-T1 | KAJ7371212.1 | embryonic hindlimb morphogenesis [Desmophyllum pertusum] | P51826 AF4/FMR2 family member 3 OS=Homo sapiens OX=9606 GN=AFF3 PE= | JBrowse |
| Lophelia pertusa | OS493_027327-T1 | KAJ7371213.1 | hypothetical protein OS493_027327 [Desmophyllum pertusum] | – | JBrowse |
