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This orthogroup contains 253 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 253 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12097 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED | 233 / 253 | 92.1% | 100.0% of 233 | ≥80% support |
| Pfam | PF08920 | SF3b1 — Splicing factor 3B subunit 1 | 210 / 253 | 83.0% | 97.7% of 215 | ≥80% support |
| GO | GO:0000245 Biological Process | spliceosomal complex assembly | 233 / 253 | 92.1% | 100.0% of 233 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 233 / 253 | 92.1% | 100.0% of 233 | ≥80% support |
| GO | GO:0005686 Cellular Component | U2 snRNP | 233 / 253 | 92.1% | 100.0% of 233 | ≥80% support |
| GO | GO:0071004 Cellular Component | U2-type prespliceosome | 233 / 253 | 92.1% | 100.0% of 233 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 233 / 253 | 92.1% | 100.0% of 233 | ≥80% support |
| GO | GO:0005689 Cellular Component | U12-type spliceosomal complex | 232 / 253 | 91.7% | 99.6% of 233 | ≥80% support |
| KEGG | K12828 | SF3B1, SAP155 — Chromosome and associated proteins | 215 / 253 | 85.0% | 100.0% of 215 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_010575-T1 | KAJ7386182.1 | Splicing factor 3B subunit 1 [Desmophyllum pertusum] | O75533 Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
