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This orthogroup contains 249 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 249 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13224 | THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED | 218 / 249 | 87.6% | 99.5% of 219 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 218 / 249 | 87.6% | 99.5% of 219 | ≥80% support |
| GO | GO:0045893 Biological Process | positive regulation of DNA-templated transcription | 218 / 249 | 87.6% | 99.5% of 219 | ≥80% support |
| Pfam | PF20718 | Med16_bridge — Mediator complex subunit 16, central helical bridge | 196 / 249 | 78.7% | 92.0% of 213 | ≥50% support |
| Pfam | PF20719 | Med16_C — Mediator complex subunit 16, C-terminal | 181 / 249 | 72.7% | 85.0% of 213 | ≥50% support |
| Pfam | PF11635 | Med16_N — Mediator complex subunit 16, N-terminal | 158 / 249 | 63.5% | 74.2% of 213 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 151 / 249 | 60.6% | 69.0% of 219 | ≥50% support |
| KEGG | K15159 | MED16 — Transcription machinery | 156 / 249 | 62.7% | 96.3% of 162 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_004080-T1 | KAJ7387115.1 | Mediator of RNA polymerase II transcription subunit 16 [Desmophyllum pertusum] | Q08D69 Mediator of RNA polymerase II transcription subunit 16 OS=Xe | JBrowse |
| Lophelia pertusa | OS493_004081-T1 | KAJ7387116.1 | Mediator of RNA polymerase II transcription subunit 16 [Desmophyllum pertusum] | Q566H4 Mediator of RNA polymerase II transcription subunit 16 OS=Xe | JBrowse |
| Lophelia pertusa | OS493_004082-T1 | KAJ7387117.1 | hypothetical protein OS493_004082 [Desmophyllum pertusum] | – | JBrowse |
