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This orthogroup contains 242 genes from 110 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 242 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13580 | TGF-BETA INDUCED APOPTOSIS PROTEIN | 228 / 242 | 94.2% | 100.0% of 228 | ≥80% support |
| Pfam | PF16019 | CSRNP_N — Cysteine/serine-rich nuclear protein N-terminus | 228 / 242 | 94.2% | 100.0% of 228 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 228 / 242 | 94.2% | 100.0% of 228 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 228 / 242 | 94.2% | 100.0% of 228 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 228 / 242 | 94.2% | 100.0% of 228 | ≥80% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 228 / 242 | 94.2% | 100.0% of 228 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_005066-T1 | KAJ7374719.1 | positive regulation of transcription by RNA polymerase II [Desmophyllum pertusum] | Q8WYN3 Cysteine/serine-rich nuclear protein 3 OS=Homo sapiens OX=96 | JBrowse |
