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This orthogroup contains 240 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 240 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11064 | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 198 / 240 | 82.5% | 100.0% of 198 | ≥80% support |
| Pfam | PF00808 | CBFD_NFYB_HMF — Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 198 / 240 | 82.5% | 100.0% of 198 | ≥80% support |
| GO | GO:0046982 Molecular Function | protein heterodimerization activity | 202 / 240 | 84.2% | 100.0% of 202 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 198 / 240 | 82.5% | 98.0% of 202 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 198 / 240 | 82.5% | 98.0% of 202 | ≥80% support |
| GO | GO:0001228 Molecular Function | DNA-binding transcription activator activity, RNA polymerase II-specific | 198 / 240 | 82.5% | 98.0% of 202 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 198 / 240 | 82.5% | 98.0% of 202 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 198 / 240 | 82.5% | 98.0% of 202 | ≥80% support |
| GO | GO:0016602 Cellular Component | CCAAT-binding factor complex | 198 / 240 | 82.5% | 98.0% of 202 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 182 / 240 | 75.8% | 90.1% of 202 | ≥50% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 182 / 240 | 75.8% | 90.1% of 202 | ≥50% support |
| KEGG | K08065 | NFYB, HAP3 — Transcription factors | 181 / 240 | 75.4% | 99.5% of 182 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_032088-T1 | KAJ7353814.1 | hypothetical protein OS493_032088 [Desmophyllum pertusum] | P25207 Nuclear transcription factor Y subunit beta OS=Gallus gallus | JBrowse |
| Lophelia pertusa | OS493_032089-T1 | KAJ7353815.1 | hypothetical protein OS493_032089 [Desmophyllum pertusum] | P25211 Nuclear transcription factor Y subunit beta (Fragment) OS=Xe | JBrowse |
