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This orthogroup contains 226 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 226 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46180 | VINCULIN | 191 / 226 | 84.5% | 100.0% of 191 | ≥80% support |
| Pfam | PF01044 | Vinculin | 192 / 226 | 85.0% | 100.0% of 192 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 194 / 226 | 85.8% | 100.0% of 194 | ≥80% support |
| GO | GO:0051015 Molecular Function | actin filament binding | 194 / 226 | 85.8% | 100.0% of 194 | ≥80% support |
| GO | GO:0003779 Molecular Function | actin binding | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0005856 Cellular Component | cytoskeleton | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0005912 Cellular Component | adherens junction | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0005925 Cellular Component | focal adhesion | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0008013 Molecular Function | beta-catenin binding | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0044291 Cellular Component | cell-cell contact zone | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| GO | GO:0045294 Molecular Function | alpha-catenin binding | 191 / 226 | 84.5% | 98.5% of 194 | ≥80% support |
| KEGG | K05700 | VCL — Exosome | 149 / 226 | 65.9% | 97.4% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_011025-T1 | KAJ7380305.1 | hypothetical protein OS493_011025 [Desmophyllum pertusum] | A0A3B6UES5 Vinculin OS=Oscarella pearsei OX=1940113 GN=VIN1 PE=1 SV=1 | JBrowse |
| Lophelia pertusa | OS493_011026-T1 | KAJ7380306.1 | hypothetical protein OS493_011026 [Desmophyllum pertusum] | Q17162 Vinculin OS=Brugia malayi OX=6279 PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_011027-T1 | KAJ7380307.1 | hypothetical protein OS493_011027 [Desmophyllum pertusum] | Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 | JBrowse |
