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This orthogroup contains 220 genes from 127 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 220 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13102 | NUCLEOLAR PROTEIN 9 | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0000056 Biological Process | ribosomal small subunit export from nucleus | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0000447 Biological Process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0000472 Biological Process | endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0000480 Biological Process | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0030686 Cellular Component | 90S preribosome | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| GO | GO:0030688 Cellular Component | preribosome, small subunit precursor | 193 / 220 | 87.7% | 100.0% of 193 | ≥80% support |
| Pfam | PF00806 | PUF — Pumilio-family RNA binding repeat | 143 / 220 | 65.0% | 98.6% of 145 | ≥50% support |
| KEGG | K14790 | NOP9 — Ribosome biogenesis | 138 / 220 | 62.7% | 98.6% of 140 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_018645-T1 | KAJ7384957.1 | Nucleolar protein 9 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_018646-T1 | KAJ7384958.1 | Nucleolar protein 9 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_018657-T1 | KAJ7384968.1 | Nucleolar protein 9 [Desmophyllum pertusum] | A3LXG0 Nucleolar protein 9 OS=Scheffersomyces stipitis (strain ATCC | JBrowse |
