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This orthogroup contains 216 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 216 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11581 | 30S/40S RIBOSOMAL PROTEIN S4 | 191 / 216 | 88.4% | 100.0% of 191 | ≥80% support |
| Pfam | PF00900 | Ribosomal_S4e — Ribosomal family S4e | 187 / 216 | 86.6% | 97.9% of 191 | ≥80% support |
| Pfam | PF16121 | 40S_S4_C — 40S ribosomal protein S4 C-terminus | 181 / 216 | 83.8% | 94.8% of 191 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 191 / 216 | 88.4% | 100.0% of 191 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 191 / 216 | 88.4% | 100.0% of 191 | ≥80% support |
| GO | GO:0005840 Cellular Component | ribosome | 191 / 216 | 88.4% | 100.0% of 191 | ≥80% support |
| GO | GO:0006412 Biological Process | translation | 191 / 216 | 88.4% | 100.0% of 191 | ≥80% support |
| GO | GO:0022627 Cellular Component | cytosolic small ribosomal subunit | 191 / 216 | 88.4% | 100.0% of 191 | ≥80% support |
| KEGG | K02987 | RP-S4e, RPS4 — Ribosome | 183 / 216 | 84.7% | 98.9% of 185 | ≥80% support |
| Pfam | PF08071 | RS4NT | 171 / 216 | 79.2% | 89.5% of 191 | ≥50% support |
| Pfam | PF00467 | KOW | 143 / 216 | 66.2% | 74.9% of 191 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_000209-T1 | KAJ7394400.1 | 40S ribosomal protein S4 [Desmophyllum pertusum] | Q90YS0 Small ribosomal subunit protein eS4 OS=Ictalurus punctatus O | JBrowse |
