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This orthogroup contains 215 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 215 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23237 | NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 | 189 / 215 | 87.9% | 100.0% of 189 | ≥80% support |
| Pfam | PF04410 | Gar1 | 188 / 215 | 87.4% | 100.0% of 188 | ≥80% support |
| GO | GO:0000454 Biological Process | snoRNA guided rRNA pseudouridine synthesis | 189 / 215 | 87.9% | 99.5% of 190 | ≥80% support |
| GO | GO:0031429 Cellular Component | box H/ACA snoRNP complex | 189 / 215 | 87.9% | 99.5% of 190 | ≥80% support |
| GO | GO:0034513 Molecular Function | box H/ACA snoRNA binding | 189 / 215 | 87.9% | 99.5% of 190 | ≥80% support |
| GO | GO:0001522 Biological Process | pseudouridine synthesis | 188 / 215 | 87.4% | 99.0% of 190 | ≥80% support |
| GO | GO:0042254 Biological Process | ribosome biogenesis | 188 / 215 | 87.4% | 99.0% of 190 | ≥80% support |
| KEGG | K11128 | GAR1, NOLA1 — DNA replication proteins | 132 / 215 | 61.4% | 100.0% of 132 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_025994-T1 | KAJ7356240.1 | H/ACA snoRNP pseudouridylase subunit [Desmophyllum pertusum] | Q7ZVE0 H/ACA ribonucleoprotein complex subunit 1 OS=Danio rerio OX= | JBrowse |
