← Back to the gene family browser
This orthogroup contains 210 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 210 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45699 | 60S ACIDIC RIBOSOMAL PROTEIN P0 | 181 / 210 | 86.2% | 100.0% of 181 | ≥80% support |
| Pfam | PF17777 | RL10P_insert — Insertion domain in 60S ribosomal protein L10P | 171 / 210 | 81.4% | 94.0% of 182 | ≥80% support |
| Pfam | PF00466 | Ribosomal_L10 — Ribosomal protein L10 | 170 / 210 | 81.0% | 93.4% of 182 | ≥80% support |
| GO | GO:0000027 Biological Process | ribosomal large subunit assembly | 181 / 210 | 86.2% | 100.0% of 181 | ≥80% support |
| GO | GO:0002181 Biological Process | cytoplasmic translation | 181 / 210 | 86.2% | 100.0% of 181 | ≥80% support |
| GO | GO:0003735 Molecular Function | structural constituent of ribosome | 181 / 210 | 86.2% | 100.0% of 181 | ≥80% support |
| GO | GO:0022625 Cellular Component | cytosolic large ribosomal subunit | 181 / 210 | 86.2% | 100.0% of 181 | ≥80% support |
| GO | GO:0070180 Molecular Function | large ribosomal subunit rRNA binding | 181 / 210 | 86.2% | 100.0% of 181 | ≥80% support |
| KEGG | K02941 | RP-LP0, RPLP0 — Ribosome | 169 / 210 | 80.5% | 97.7% of 173 | ≥80% support |
| Pfam | PF00428 | Ribosomal_60s — 60s Acidic ribosomal protein | 165 / 210 | 78.6% | 90.7% of 182 | ≥50% support |
| GO | GO:0042254 Biological Process | ribosome biogenesis | 156 / 210 | 74.3% | 86.2% of 181 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_007906-T1 | KAJ7337753.1 | 60S acidic ribosomal protein P0 [Desmophyllum pertusum] | P47826 Large ribosomal subunit protein uL10 OS=Gallus gallus OX=903 | JBrowse |
