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This orthogroup contains 192 genes from 91 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 192 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24006 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | 124 / 192 | 64.6% | 99.2% of 125 | ≥50% support |
| Pfam | PF00443 | UCH — Ubiquitin carboxyl-terminal hydrolase | 126 / 192 | 65.6% | 92.0% of 137 | ≥50% support |
| GO | GO:0004843 Molecular Function | cysteine-type deubiquitinase activity | 126 / 192 | 65.6% | 92.0% of 137 | ≥50% support |
| GO | GO:0016579 Biological Process | protein deubiquitination | 126 / 192 | 65.6% | 92.0% of 137 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 124 / 192 | 64.6% | 90.5% of 137 | ≥50% support |
| GO | GO:0005829 Cellular Component | cytosol | 124 / 192 | 64.6% | 90.5% of 137 | ≥50% support |
| KEGG | K11869 | USP40 — Ubiquitin system | 107 / 192 | 55.7% | 99.1% of 108 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_030547-T1 | KAJ7354770.1 | ubiquitin-like protein-specific protease [Desmophyllum pertusum] | Q8BWR4 Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus OX= | JBrowse |
| Lophelia pertusa | OS493_033837-T1 | KAJ7370212.1 | peptidase C19, partial [Desmophyllum pertusum] | Q8BWR4 Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus OX= | JBrowse |
| Lophelia pertusa | OS493_036414-T1 | KAJ7369771.1 | peptidase C19 [Desmophyllum pertusum] | Q8BWR4 Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus OX= | JBrowse |
