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This orthogroup contains 182 genes from 130 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 182 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR28314 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 29 | 159 / 182 | 87.4% | 100.0% of 159 | ≥80% support |
| Pfam | PF11568 | Med29 — Mediator complex subunit 29 | 161 / 182 | 88.5% | 100.0% of 161 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 161 / 182 | 88.5% | 99.4% of 162 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 159 / 182 | 87.4% | 98.2% of 162 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 159 / 182 | 87.4% | 98.2% of 162 | ≥80% support |
| GO | GO:0008134 Molecular Function | transcription factor binding | 159 / 182 | 87.4% | 98.2% of 162 | ≥80% support |
| KEGG | K15142 | MED29 — Transcription machinery | 95 / 182 | 52.2% | 100.0% of 95 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_024989-T1 | KAJ7357473.1 | Mediator of RNA polymerase II transcription subunit 29 [Desmophyllum pertusum] | Q66KX4 Mediator of RNA polymerase II transcription subunit 29 OS=Xe | JBrowse |
| Lophelia pertusa | OS493_025027-T1 | KAJ7357473.1 | Mediator of RNA polymerase II transcription subunit 29 [Desmophyllum pertusum] | Q66KX4 Mediator of RNA polymerase II transcription subunit 29 OS=Xe | JBrowse |
