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This orthogroup contains 182 genes from 110 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 182 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12473 | UNCHARACTERIZED | 164 / 182 | 90.1% | 100.0% of 164 | ≥80% support |
| Pfam | PF13898 | MINDY-3_4_CD — Deubiquitinating enzyme MINDY-3/4, conserved domain | 162 / 182 | 89.0% | 100.0% of 162 | ≥80% support |
| GO | GO:0004843 Molecular Function | cysteine-type deubiquitinase activity | 164 / 182 | 90.1% | 99.4% of 165 | ≥80% support |
| GO | GO:0071108 Biological Process | protein K48-linked deubiquitination | 164 / 182 | 90.1% | 99.4% of 165 | ≥80% support |
| GO | GO:1990380 Molecular Function | K48-linked deubiquitinase activity | 164 / 182 | 90.1% | 99.4% of 165 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 109 / 182 | 59.9% | 66.1% of 165 | ≥50% support |
| KEGG | K22647 | MINDY3_4 — Ubiquitin system | 119 / 182 | 65.4% | 100.0% of 119 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_026974-T1 | KAJ7371328.1 | hypothetical protein OS493_026974 [Desmophyllum pertusum] | Q0IIH8 Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Bos taurus | JBrowse |
| Lophelia pertusa | OS493_039298-T1 | KAJ7314522.1 | hypothetical protein OS493_039298 [Desmophyllum pertusum] | A0AUR5 Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Danio rerio | JBrowse |
