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This orthogroup contains 181 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 181 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12962 | CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED | 162 / 181 | 89.5% | 100.0% of 162 | ≥80% support |
| Pfam | PF00313 | CSD — 'Cold-shock' DNA-binding domain | 155 / 181 | 85.6% | 100.0% of 155 | ≥80% support |
| GO | GO:0003730 Molecular Function | mRNA 3'-UTR binding | 162 / 181 | 89.5% | 100.0% of 162 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 162 / 181 | 89.5% | 100.0% of 162 | ≥80% support |
| GO | GO:0043488 Biological Process | regulation of mRNA stability | 162 / 181 | 89.5% | 100.0% of 162 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 158 / 181 | 87.3% | 97.5% of 162 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_011079-T1 | KAJ7373484.1 | Calcium-regulated heat stable protein 1 [Desmophyllum pertusum] | Q9Y534 Cold shock domain-containing protein C2 OS=Homo sapiens OX=9 | JBrowse |
