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This orthogroup contains 165 genes from 35 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 165 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10877 | POLYCYSTIN FAMILY MEMBER | 130 / 165 | 78.8% | 96.3% of 135 | ≥50% support |
| Pfam | PF20519 | Polycystin_dom — Polycystin domain | 101 / 165 | 61.2% | 72.7% of 139 | ≥50% support |
| Pfam | PF01477 | PLAT | 93 / 165 | 56.4% | 66.9% of 139 | ≥50% support |
| GO | GO:0005262 Molecular Function | calcium channel activity | 125 / 165 | 75.8% | 95.4% of 131 | ≥50% support |
| GO | GO:0016020 Cellular Component | membrane | 125 / 165 | 75.8% | 95.4% of 131 | ≥50% support |
| GO | GO:0050982 Biological Process | detection of mechanical stimulus | 125 / 165 | 75.8% | 95.4% of 131 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 94 / 165 | 57.0% | 71.8% of 131 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Lophelia pertusa | OS493_007441-T1 | KAJ7374352.1 | hypothetical protein OS493_007441 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_007442-T1 | KAJ7374353.1 | hypothetical protein OS493_007442 [Desmophyllum pertusum] | Q4GZT3 Polycystin-2 OS=Bos taurus OX=9913 GN=PKD2 PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_034884-T1 | KAJ7382447.1 | hypothetical protein OS493_034884 [Desmophyllum pertusum] | Q4GZT3 Polycystin-2 OS=Bos taurus OX=9913 GN=PKD2 PE=2 SV=1 | JBrowse |
| Lophelia pertusa | OS493_034885-T1 | KAJ7382448.1 | hypothetical protein OS493_034885 [Desmophyllum pertusum] | Q2EG98 Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Lophelia pertusa | OS493_034886-T1 | KAJ7382449.1 | hypothetical protein OS493_034886 [Desmophyllum pertusum] | H2LRU7 Polycystin-2 OS=Oryzias latipes OX=8090 GN=pkd2 PE=1 SV=2 | JBrowse |
| Lophelia pertusa | OS493_034889-T1 | KAJ7382452.1 | hypothetical protein OS493_034889 [Desmophyllum pertusum] | – | JBrowse |
| Lophelia pertusa | OS493_034892-T1 | KAJ7382455.1 | hypothetical protein OS493_034892 [Desmophyllum pertusum] | – | JBrowse |
