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This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Millepora alcicornis | ENSCIQP00000018161.1 | OAX39956.1 | RNA-binding domain-containing protein [Rhizopogon vinicolor AM-OR11-026] | Q28IQ9 Cold-inducible RNA-binding protein OS=Xenopus tropicalis OX= | JBrowse |
| Millepora alcicornis | ENSCIQP00000018821.1 | OAX39956.1 | RNA-binding domain-containing protein [Rhizopogon vinicolor AM-OR11-026] | Q28IQ9 Cold-inducible RNA-binding protein OS=Xenopus tropicalis OX= | JBrowse |
| Millepora alcicornis | ENSCIQP00000018832.1 | HIA91875.1 | RNA-binding protein [Candidatus Saccharibacteria bacterium] | Q9PTX2 Cold-inducible RNA-binding protein OS=Aquarana catesbeiana O | JBrowse |
| Millepora alcicornis | ENSCIQP00000019245.1 | XP_012562219.1 | glycine-rich RNA-binding protein 1 [Hydra vulgaris] | Q03878 Glycine-rich RNA-binding protein OS=Daucus carota OX=4039 PE | JBrowse |
| Millepora alcicornis | ENSCIQP00000021608.1 | XP_002153804.2 | RNA-binding protein 3 [Hydra vulgaris] | Q03251 Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana O | JBrowse |
| Millepora alcicornis | ENSCIQP00000021616.1 | XP_002153804.2 | RNA-binding protein 3 [Hydra vulgaris] | Q03251 Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana O | JBrowse |
| Millepora alcicornis | ENSCIQP00000021847.1 | XP_012560932.1 | glycine-rich RNA-binding protein 10 [Hydra vulgaris] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Millepora alcicornis | ENSCIQP00000021857.1 | XP_012560932.1 | glycine-rich RNA-binding protein 10 [Hydra vulgaris] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
