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This orthogroup contains 318 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 318 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR19376 | DNA-DIRECTED RNA POLYMERASE | 280 / 318 | 88.1% | 99.6% of 281 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 281 / 318 | 88.4% | 99.7% of 282 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 281 / 318 | 88.4% | 99.7% of 282 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 280 / 318 | 88.1% | 99.3% of 282 | ≥80% support |
| GO | GO:0001054 Molecular Function | RNA polymerase I activity | 279 / 318 | 87.7% | 98.9% of 282 | ≥80% support |
| GO | GO:0005736 Cellular Component | RNA polymerase I complex | 279 / 318 | 87.7% | 98.9% of 282 | ≥80% support |
| Pfam | PF04998 | RNA_pol_Rpb1_5 — RNA polymerase Rpb1, domain 5 | 230 / 318 | 72.3% | 81.9% of 281 | ≥50% support |
| Pfam | PF04983 | RNA_pol_Rpb1_3 — RNA polymerase Rpb1, domain 3 | 213 / 318 | 67.0% | 75.8% of 281 | ≥50% support |
| Pfam | PF00623 | RNA_pol_Rpb1_2 — RNA polymerase Rpb1, domain 2 | 207 / 318 | 65.1% | 73.7% of 281 | ≥50% support |
| Pfam | PF05000 | RNA_pol_Rpb1_4 — RNA polymerase Rpb1, domain 4 | 203 / 318 | 63.8% | 72.2% of 281 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Millepora alcicornis | ENSCIQP00000009258.1 | XP_047128509.1 | DNA-directed RNA polymerase I subunit RPA1 isoform X1 [Hydra vulgaris] | O95602 DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens O | JBrowse |
| Millepora alcicornis | ENSCIQP00000011603.1 | XP_047128510.1 | DNA-directed RNA polymerase I subunit RPA1 isoform X2 [Hydra vulgaris] | O95602 DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens O | JBrowse |
| Millepora alcicornis | ENSCIQP00000011613.1 | XP_047128510.1 | DNA-directed RNA polymerase I subunit RPA1 isoform X2 [Hydra vulgaris] | O95602 DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens O | JBrowse |
| Millepora alcicornis | ENSCIQP00000012634.1 | XP_047128510.1 | DNA-directed RNA polymerase I subunit RPA1 isoform X2 [Hydra vulgaris] | – | JBrowse |
| Millepora alcicornis | ENSCIQP00000013925.1 | XP_047128510.1 | DNA-directed RNA polymerase I subunit RPA1 isoform X2 [Hydra vulgaris] | O54889 DNA-directed RNA polymerase I subunit RPA1 OS=Rattus norvegi | JBrowse |
