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Support counts the member genes carrying the term. % of genes is that count over all 1,097 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00412 | LIM | 1016 / 1,097 | 92.6% | 99.5% of 1,021 | ≥80% support |
| PANTHER | PTHR45787 | LD11652P | 800 / 1,097 | 72.9% | 78.4% of 1,021 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 661 / 1,097 | 60.3% | 99.9% of 662 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g10118.t1 | XP_020624387.1 | LIM domain only protein 3-like [Orbicella faveolata] | Q3B8H4 Rhombotin-1 OS=Xenopus laevis OX=8355 GN=lmo1 PE=2 SV=1 | JBrowse |
| Montipora capitata | g11998.t1 | XP_029179875.1 | LIM domain transcription factor LMO4.1-like [Acropora millepora] | Q99MB5 LIM domain only protein 3 OS=Rattus norvegicus OX=10116 GN=L | JBrowse |
| Montipora capitata | g15219.t1 | XP_015768156.1 | PREDICTED: LIM/homeobox protein Lhx9-like isoform X2 [Acropora digitifera] | A0JNI8 LIM/homeobox protein Lhx9 OS=Bos taurus OX=9913 GN=LHX9 PE=2 | JBrowse |
| Montipora capitata | g3167.t1 | XP_015770990.1 | PREDICTED: LIM domain only protein 3-like [Acropora digitifera] | Q503U0 LIM domain only protein 3 OS=Danio rerio OX=7955 GN=lmo3 PE= | JBrowse |
| Montipora capitata | g3247.t1 | XP_029212220.1 | LIM domain only protein 3-like [Acropora millepora] | Q99MB5 LIM domain only protein 3 OS=Rattus norvegicus OX=10116 GN=L | JBrowse |
| Montipora capitata | g3248.t1 | XP_015772778.1 | PREDICTED: LIM domain only protein 3-like [Acropora digitifera] | Q503U0 LIM domain only protein 3 OS=Danio rerio OX=7955 GN=lmo3 PE= | JBrowse |
| Montipora capitata | g5178.t1 | XP_020615792.1 | LIM domain transcription factor LMO4.2-like isoform X3 [Orbicella faveolata] | Q6DJ06 LIM domain transcription factor LMO4.2 OS=Xenopus tropicalis | JBrowse |
