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Support counts the member genes carrying the term. % of genes is that count over all 678 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11669 | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 594 / 678 | 87.6% | 99.5% of 597 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 595 / 678 | 87.8% | 98.5% of 604 | ≥80% support |
| GO | GO:0003689 Molecular Function | DNA clamp loader activity | 594 / 678 | 87.6% | 98.3% of 604 | ≥80% support |
| GO | GO:0005663 Cellular Component | DNA replication factor C complex | 594 / 678 | 87.6% | 98.3% of 604 | ≥80% support |
| GO | GO:0006261 Biological Process | DNA-templated DNA replication | 594 / 678 | 87.6% | 98.3% of 604 | ≥80% support |
| GO | GO:0006281 Biological Process | DNA repair | 594 / 678 | 87.6% | 98.3% of 604 | ≥80% support |
| Pfam | PF08542 | Rep_fac_C — Replication factor C C-terminal domain | 531 / 678 | 78.3% | 88.5% of 600 | ≥50% support |
| Pfam | PF00004 | AAA | 505 / 678 | 74.5% | 84.2% of 600 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 538 / 678 | 79.4% | 89.1% of 604 | ≥50% support |
| GO | GO:0006260 Biological Process | DNA replication | 536 / 678 | 79.1% | 88.7% of 604 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 508 / 678 | 74.9% | 84.1% of 604 | ≥50% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 507 / 678 | 74.8% | 83.9% of 604 | ≥50% support |
| KEGG | K10755 | RFC2_4 — DNA repair and recombination proteins | 341 / 678 | 50.3% | 66.2% of 515 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g15799.t1 | XP_020622445.1 | replication factor C subunit 2-like [Orbicella faveolata] | Q05B83 Replication factor C subunit 2 OS=Bos taurus OX=9913 GN=RFC2 | JBrowse |
| Montipora capitata | g3203.t1 | XP_044180147.1 | LOW QUALITY PROTEIN: replication factor C subunit 4-like [Acropora millepora] | P35249 Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RF | JBrowse |
