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This orthogroup contains 674 genes from 148 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 674 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10969 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED | 594 / 674 | 88.1% | 100.0% of 594 | ≥80% support |
| Pfam | PF02991 | ATG8 | 597 / 674 | 88.6% | 100.0% of 597 | ≥80% support |
| GO | GO:0006995 Biological Process | cellular response to nitrogen starvation | 594 / 674 | 88.1% | 100.0% of 594 | ≥80% support |
| GO | GO:0005776 Cellular Component | autophagosome | 590 / 674 | 87.5% | 99.3% of 594 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 590 / 674 | 87.5% | 99.3% of 594 | ≥80% support |
| GO | GO:0016236 Biological Process | macroautophagy | 590 / 674 | 87.5% | 99.3% of 594 | ≥80% support |
| GO | GO:0000045 Biological Process | autophagosome assembly | 589 / 674 | 87.4% | 99.2% of 594 | ≥80% support |
| GO | GO:0000421 Cellular Component | autophagosome membrane | 589 / 674 | 87.4% | 99.2% of 594 | ≥80% support |
| GO | GO:0000422 Biological Process | autophagy of mitochondrion | 589 / 674 | 87.4% | 99.2% of 594 | ≥80% support |
| GO | GO:0031625 Molecular Function | ubiquitin protein ligase binding | 589 / 674 | 87.4% | 99.2% of 594 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Montipora capitata | g13303.t1 | XP_015753581.1 | PREDICTED: microtubule-associated proteins 1A/1B light chain 3A-like [Acropora digitifera] | Q2HJ23 Microtubule-associated protein 1 light chain 3 alpha OS=Bos | JBrowse |
| Montipora capitata | g16570.t1 | CAH3040314.1 | unnamed protein product [Porites lobata] | Q9BXW4 Microtubule-associated protein 1 light chain 3 gamma OS=Homo | JBrowse |
| Montipora capitata | g30189.t1 | CAH3015074.1 | unnamed protein product [Porites evermanni] | P60519 Gamma-aminobutyric acid receptor-associated protein-like 2 O | JBrowse |
| Montipora capitata | g8390.t1 | XP_015751911.1 | PREDICTED: gamma-aminobutyric acid receptor-associated protein [Acropora digitifera] | Q9GJW7 Gamma-aminobutyric acid receptor-associated protein OS=Bos t | JBrowse |
